Thhalv10010986m.g (Eutrema salsugineum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Thhalv10010986m.g T196829_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10010986m GATA 152 187

Links

Other GATA family TFs
Other Eutrema salsugineum TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG000360.1 Alligator sinensis Alligator_sinensis_CCG000360.1 N 0.000
TCF15 Anolis carolinensis ENSACAG00000011172 N 0.000
ENSAMXG00000001669 Astyanax mexicanus ENSAMXG00000001669 N 0.000
ENSP00000246080-D1 Bos grunniens ENSP00000246080-D1 N 0.000
TCF15 Bos taurus ENSBTAG00000005750 N 0.000
TCF15 Callithrix jacchus ENSCJAG00000020866 N 0.000
TCF15 Canis familiaris ENSCAFG00000006930 N 0.000
Cmyd_10009563 Chelonia mydas Cmyd_10009563 N 0.000
ENSCSAG00000010467 Chlorocebus sabaeus ENSCSAG00000010467 N 0.000
tcf15 Danio rerio ENSDARG00000067544 N 0.000
TCF15 Dasypus novemcinctus ENSDNOG00000045300 N 0.000
ENSDORG00000013778 Dipodomys ordii ENSDORG00000013778 N 0.000
TCF15 Echinops telfairi ENSETEG00000009717 N 0.000
TCF15 Equus caballus ENSECAG00000002411 N 0.000
TCF15 Erinaceus europaeus ENSEEUG00000007767 N 0.000
ENSFALG00000005713 Ficedula albicollis ENSFALG00000005713 N 0.000
ENSGMOG00000017351 Gadus morhua ENSGMOG00000017351 N 0.000
ENSGMOG00000019517 Gadus morhua ENSGMOG00000019517 N 0.000
TCF15 Gallus gallus ENSGALG00000026276 N 0.000
TCF15 Gasterosteus aculeatus ENSGACG00000011390 N 0.000
tcf15 Gasterosteus aculeatus ENSGACG00000011799 N 0.000
Gfo_R005304 Geospiza fortis Gfo_R005304 N 0.000
TCF15 Gorilla gorilla ENSGGOG00000015133 N 0.000
TCF15 Homo sapiens ENSG00000125878 N 0.000
ENSLACG00000000721 Latimeria chalumnae ENSLACG00000000721 N 0.000
ENSLOCG00000002219 Lepisosteus oculatus ENSLOCG00000002219 N 0.000
TCF15 Loxodonta africana ENSLAFG00000001884 N 0.000
TCF15 Macaca mulatta ENSMMUG00000022546 N 0.000
TCF15 Meleagris gallopavo ENSMGAG00000007877 N 0.000
TCF15 Microcebus murinus ENSMICG00000004647 N 0.000
TCF15 Monodelphis domestica ENSMODG00000019526 N 0.000
Tcf15 Mus musculus ENSMUSG00000068079 N 0.000
TCF15 Myotis lucifugus ENSMLUG00000014021 N 0.000
ENSNLEG00000009426 Nomascus leucogenys ENSNLEG00000009426 N 0.000
TCF15 Ochotona princeps ENSOPRG00000005163 N 0.000
Ogr14597 Ophisaurus gracilis Ogr14597 N 0.000
ENSONIG00000016756 Oreochromis niloticus ENSONIG00000016756 N 0.000
TCF15 Oryctolagus cuniculus ENSOCUG00000000528 N 0.000
tcf15 Oryzias latipes ENSORLG00000015082 N 0.000
TCF15 Otolemur garnettii ENSOGAG00000015444 N 0.000
ENSOARG00000019015 Ovis aries ENSOARG00000019015 N 0.000
ENSPANG00000013449 Papio anubis ENSPANG00000013449 N 0.000
ENSPFOG00000007762 Poecilia formosa ENSPFOG00000007762 N 0.000
Pvit_17687 Pogona vitticeps Pvit_17687 N 0.000
TCF15 Pteropus vampyrus ENSPVAG00000012767 N 0.000
Tcf15 Rattus norvegicus ENSRNOG00000000012 N 0.000
ENSSHAG00000007757 Sarcophilus harrisii ENSSHAG00000007757 N 0.000
ENSSSCG00000007202 Sus scrofa ENSSSCG00000007202 N 0.000
TCF15 Taeniopygia guttata ENSTGUG00000006794 N 0.000
tcf15 Takifugu rubripes ENSTRUG00000007678 N 0.000
tcf15 Tetraodon nigroviridis ENSTNIG00000012471 N 0.000
TCF15 Tursiops truncatus ENSTTRG00000007058 N 0.000
tcf15.L Xenopus laevis XB-GENE-6252545 N 0.000
tcf15 Xenopus tropicalis XB-GENE-488935 N 0.000
ENSXMAG00000011591 Xiphophorus maculatus ENSXMAG00000011591 N 0.000