CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK04189.1
(
Cannabis sativa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
PK04189.1
T196907_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK04189.1
GATA
215
252
CQHCGINEKCTPAMRRGPGGPRSLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Cannabis sativa
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG810857
Hyaloperonospora arabidopsidis
HpaG810857
I
0.000
HpaG811464
Hyaloperonospora arabidopsidis
HpaG811464
N
0.000
fgenesh1_kg.C_scaffold_15000102
Phytophthora capsici
fgenesh1_kg.C_scaffold_15000102
I
0.000
estExt_Genewise1Plus.C_2050016
Phytophthora capsici
estExt_Genewise1Plus.C_2050016
I
0.000
estExt_fgenesh1_pm.C_680840001
Phytophthora capsici
estExt_fgenesh1_pm.C_680840001
N
0.000
PITG_14400
Phytophthora infestans
PITG_14400
I
0.000
PITG_11710
Phytophthora infestans
PITG_11710
N
0.000
fgenesh_scip_prom.46568.7328
Phytophthora kernoviae
fgenesh_scip_prom.46568.7328
N
0.000
fgenesh_scip_prom.46568.9768
Phytophthora kernoviae
fgenesh_scip_prom.46568.9768
N
0.000
fgenesh_scip_prom.28083.11537
Phytophthora lateralis
fgenesh_scip_prom.28083.11537
N
0.000
fgenesh_scip_prom.28083.3854
Phytophthora lateralis
fgenesh_scip_prom.28083.3854
N
0.000
F443_20702
Phytophthora parasitica
F443_20702
I
0.000
F443_20671
Phytophthora parasitica
F443_20671
I
0.000
Phyra78879
Phytophthora ramorum
Phyra78879
N
0.000
Phyra80922
Phytophthora ramorum
Phyra80922
N
0.000
Physo132945
Phytophthora sojae
Physo132945
I
0.000
Physo132965
Phytophthora sojae
Physo132965
N
0.000
maker-pir_contig_524-snap-gene-0.9
Pythium irregulare
maker-pir_contig_524-snap-gene-0.9
N
0.000
maker-pir_contig_516-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.3
N
0.000
maker-piw_contig_841-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_841-fgenesh-gene-0.2
N
0.000
PYU1_G002844
Pythium ultimum
PYU1_G002844
N
0.000
maker-pve_contig_871-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_871-fgenesh-gene-0.0
N
0.000