11320_YIR013C (Saccharomyces paradoxus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 11320_YIR013C T196995_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAT4
M00050_2.00 		Saccharomyces cerevisiae
NNAGATCTMN
NKAGATCTNN		 PBM
Badis et al.(2008)
GAT4_4527 		0.867 1.000
GAT4
M01547_2.00 		Saccharomyces cerevisiae
NNNRWWYNNN
NNNRWWYNNN		 PBM
Zhu et al.(2009)
Gat4 		0.867 1.000
GAT4
M07479_2.00 		Saccharomyces cerevisiae
NNAGATCYNNN
NNNRGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0302.1 		0.867 1.000
GAT4
M08561_2.00 		Saccharomyces cerevisiae
NNAGATCYNNN
NNNRGATCTNN		 Misc
DeBoer et al.(2011)
YIR013C_565 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
11320_YIR013C GATA 53 89

Links

Other GATA family TFs
Other Saccharomyces paradoxus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia03528 Panicum virgatum Pavir.Ia03528 N
Pavir.Ib01437 Panicum virgatum Pavir.Ib01437 N
Si039895m.g Setaria italica Si039895m.g N
Sb01g037520 Sorghum bicolor Sb01g037520 N
GRMZM2G038015 Zea mays GRMZM2G038015 N