nAv.1.0.1.g01738 (Acanthocheilonema viteae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 nAv.1.0.1.g01738 T197675_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GZF3
M00051_2.00 		Saccharomyces cerevisiae
HGATAAGN
NCTTATCD		 PBM
Badis et al.(2008)
GZF3_2167 		0.817 0.543
GZF3
M01548_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gzf3 		0.817 0.543
DAL80
M00052_2.00 		Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN		 PBM
Badis et al.(2008)
DAL80_2083 		0.817 0.543
GZF3
M07480_2.00 		Saccharomyces cerevisiae
HGATAASN
NSTTATCD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1 		0.817 0.543
DAL80
M07481_2.00 		Saccharomyces cerevisiae
YGATAAG
CTTATCR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1 		0.817 0.543
GZF3
M08562_2.00 		Saccharomyces cerevisiae
GATAAG
CTTATC		 Misc
DeBoer et al.(2011)
YJL110C_593 		0.817 0.543
DAL80
M08564_2.00 		Saccharomyces cerevisiae
VNMGATAD
HTATCKNB		 Misc
DeBoer et al.(2011)
YKR034W_1355 		0.817 0.543
GAT1
M00049_2.00 		Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN		 PBM
Badis et al.(2008)
GAT1_2166 		0.803 0.571
GAT1
M01546_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gat1 		0.803 0.571
GAT1
M07478_2.00 		Saccharomyces cerevisiae
NHGATAAG
CTTATCDN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1 		0.803 0.571
GAT1
M08560_2.00 		Saccharomyces cerevisiae
WKTGATWW
WWATCAMW		 Misc
DeBoer et al.(2011)
YFL021W_962 		0.803 0.571
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t01738-RA GATA 260 294

Links

Other GATA family TFs
Other Acanthocheilonema viteae TFs

372 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_03607 Ancylostoma caninum ANCCAN_03607 N
HCOI00768500 Haemonchus contortus HCOI00768500 N
HCOI01679700 Haemonchus contortus HCOI01679700 N
HPLM_0000324901 Haemonchus placei HPLM_0000324901 N
NECAME_03360 Necator americanus NECAME_03360 N
NBR_0002027301 Nippostrongylus brasiliensis NBR_0002027301 N
SVUK_0000879801 Strongylus vulgaris SVUK_0000879801 N