nLs.2.1.2.g04395 (Litomosoides sigmodontis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 nLs.2.1.2.g04395 T197704_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG13549
M01231_2.00 		Caenorhabditis briggsae
NTGATAAN
NTTATCAN		 PBM
Lambert et al.(2019)
pTH11492 		0.856 0.886
elt-6
M00666_2.00 		Caenorhabditis elegans
NTGATAAN
NTTATCAN		 PBM
Narasimhan et al.(2015)
pTH10707 		0.851 0.857
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t04395-RA GATA 268 302

Links

Other GATA family TFs
Other Litomosoides sigmodontis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG015510.1 Alligator sinensis Alligator_sinensis_CCG015510.1 N
ENSAPLG00000005097 Anas platyrhynchos ENSAPLG00000005097 N
ENSACAG00000002708 Anolis carolinensis ENSACAG00000002708 N
Afo_R009925 Aptenodytes forsteri Afo_R009925 N
ENSAMXG00000008703 Astyanax mexicanus ENSAMXG00000008703 N
Brh_R004220 Buceros rhinoceros Brh_R004220 N
Aan_R010858 Calypte anna Aan_R010858 N
Cmyd_10008757 Chelonia mydas Cmyd_10008757 N
ENSFALG00000004045 Ficedula albicollis ENSFALG00000004045 N
ENSGALG00000028415 Gallus gallus ENSGALG00000028415 N
ENSLACG00000002946 Latimeria chalumnae ENSLACG00000002946 N
ENSLOCG00000004481 Lepisosteus oculatus ENSLOCG00000004481 N
ENSMGAG00000004179 Meleagris gallopavo ENSMGAG00000004179 N
Ogr14077 Ophisaurus gracilis Ogr14077 N
ENSONIG00000007948 Oreochromis niloticus ENSONIG00000007948 N
ENSOANG00000011082 Ornithorhynchus anatinus ENSOANG00000011082 N
ENSPSIG00000003795 Pelodiscus sinensis ENSPSIG00000003795 N
ENSPFOG00000004012 Poecilia formosa ENSPFOG00000004012 N
Pvit_19128 Pogona vitticeps Pvit_19128 N
ENSTGUG00000005406 Taeniopygia guttata ENSTGUG00000005406 N
her8.2 Takifugu rubripes ENSTRUG00000006663 N
her8.2 Tetraodon nigroviridis ENSTNIG00000000385 N
ENSXMAG00000002506 Xiphophorus maculatus ENSXMAG00000002506 N