CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SBAD_0000818101
(
Soboliphyme baturini
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
SBAD_0000818101
T197771_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN
NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.855
0.743
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN
NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.850
0.714
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SBAD_0000818101-mRNA-1
GATA
74
108
CANCFTTTTTAWRRDRFGRLVCNACGLYYRLHKAR
Links
Other
GATA
family TFs
Other
Soboliphyme baturini
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MELLADRAFT_104398
Melampsora laricipopulina
MELLADRAFT_104398
N
PGTG_15882
Puccinia graminis
PGTG_15882
N
PTTG_05943
Puccinia triticina
PTTG_05943
N