TRE_0001903701 (Trichobilharzia regenti)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 TRE_0001903701 T197890_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATAe
M03761_2.00 		Drosophila melanogaster
VHGATAAS
STTATCDB		 SELEX
Nitta et al.(2015)
GATAe_1 		0.836 0.686
GATAe
M03762_2.00 		Drosophila melanogaster
HGATAACNNNGTTATCD
HGATAACNNNGTTATCD		 SELEX
Nitta et al.(2015)
GATAe_2 		0.836 0.686
GATAe
M03763_2.00 		Drosophila melanogaster
HGATAAGNNNCTTATCD
HGATAAGNNNCTTATCD		 SELEX
Nitta et al.(2015)
GATAe_3 		0.836 0.686
GATAe
M06208_2.00 		Drosophila melanogaster
WGATAAG
CTTATCW		 B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391 		0.836 0.686
nit-2
M02017_2.00 		Neurospora crassa
NNGATHNN
NNDATCNN		 PBM
Weirauch et al.(2014)
pTH8624 		0.834 0.714
nit-2
M10601_2.00 		Neurospora crassa
DHGATA
TATCDH		 Transfac
Matys et al.(2006)
F$NIT2_01 		0.834 0.714
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001903701-mRNA-1 GATA 3 37

Links

Other GATA family TFs
Other Trichobilharzia regenti TFs

437 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA004020 Anopheles arabiensis AARA004020 I
ADIR005096 Anopheles dirus ADIR005096 I
AEPI009051 Anopheles epiroticus AEPI009051 I
AFUN000829 Anopheles funestus AFUN000829 I
AGAP009749 Anopheles gambiae AGAP009749 I
AMEC017008 Anopheles melas AMEC017008 I
AQUA011339 Anopheles quadriannulatus AQUA011339 I
GB44259 Apis mellifera GB44259 N
ACEP18972 Atta cephalotes ACEP18972 I
CapteG180266 Capitella teleta CapteG180266 N
CpipJ_CPIJ014773 Culex pipiens CpipJ_CPIJ014773 I
CPIJ014773 Culex quinquefasciatus CPIJ014773 I
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I
YQE_09240 Dendroctonus ponderosae YQE_09240 I
EmuJ_000805200 Echinococcus multilocularis EmuJ_000805200 N
Hsal_13684--XP_394708.3_APIME Harpegnathos saltator Hsal_13684--XP_394708.3_APIME I
HelroG110615 Helobdella robusta HelroG110615 N
LotgiG179263 Lottia gigantea LotgiG179263 N
PHUM505970 Pediculus humanus PHUM505970 I
SMAR013730 Strigamia maritima SMAR013730 N
TC004710 Tribolium castaneum TC004710 I
L798_12084 Zootermopsis nevadensis L798_12084 I