CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_09588
(
Verticillium albo atrum
)
GCR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF12550 (GCR1_C)
IPR022210
VDBG_09588
T198343_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_09588T0
GCR1
425
502
FAFNKHPETVREQWDEYEHGLAGQRAVRLLDERYTTKWRRDTYARTWYSRRKRFWGVCKELLKRGLSEDEMVATIESF
Links
Other
GCR1
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_23182
Aegilops tauschii
F775_23182
I
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
OBART01G35310
Oryza barthii
OBART01G35310
I
OB01G44140
Oryza brachyantha
OB01G44140
I
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
OMERI01G32480
Oryza meridionalis
OMERI01G32480
I
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
OS01G0820700
Oryza sativa
OS01G0820700
I
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
TRAES3BF081400030CFD_g
Triticum aestivum
TRAES3BF081400030CFD_g
I
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I