AGOS_AEL245W (Ashbya gossypii)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF12550 (GCR1_C) IPR022210 AGOS_AEL245W T198359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCR1
M00914_2.00 		Saccharomyces cerevisiae
RGVDDCBWVW
WBWVGHHBCY		 PBM
Gordan et al.(2011)
Gcr1 		0.734 0.734
GCR1
M08569_2.00 		Saccharomyces cerevisiae
VCTTCCH
DGGAAGB		 Misc
DeBoer et al.(2011)
YPL075W_2071 		0.734 0.734
GCR1
M10606_2.00 		Saccharomyces cerevisiae
RKCTTCCWS
SWGGAAGYY		 Transfac
Matys et al.(2006)
F$GCR1_01 		0.734 0.734
GCR1
M10607_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$GCR1_B 		0.734 0.734
GCR1
M10608_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$GCR1_Q4 		0.734 0.734
GCR1
M08456_2.00 		Saccharomyces cerevisiae
RKCTTCCW
WGGAAGMY		 COMPILED
Mathelier et al.(2014)
MA0304.1 		0.734 0.734
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAS52440 GCR1 565 656

Links

Other GCR1 family TFs
Other Ashbya gossypii TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_27564 Aegilops tauschii F775_27564 I
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I
BRADI3G56080 Brachypodium distachyon BRADI3G56080 I
LPERR08G20450 Leersia perrieri LPERR08G20450 I
mgf000623m Mimulus guttatus mgf000623m I
OBART02G37700 Oryza barthii OBART02G37700 I
OBART08G23760 Oryza barthii OBART08G23760 I
OB02G44540 Oryza brachyantha OB02G44540 I
OB08G30590 Oryza brachyantha OB08G30590 I
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I
ORGLA02G0329400 Oryza glaberrima ORGLA02G0329400 I
OGLUM02G38880 Oryza glumaepatula OGLUM02G38880 I
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I
BGIOSGA026481 Oryza indica BGIOSGA026481 I
BGIOSGA009316 Oryza indica BGIOSGA009316 I
OLONG_023179 Oryza longistaminata OLONG_023179 I
OMERI08G18580 Oryza meridionalis OMERI08G18580 I
ONIVA02G40500 Oryza nivara ONIVA02G40500 I
ONIVA08G26810 Oryza nivara ONIVA08G26810 I
OPUNC02G34910 Oryza punctata OPUNC02G34910 I
OPUNC08G21700 Oryza punctata OPUNC08G21700 I
ORUFI02G39260 Oryza rufipogon ORUFI02G39260 I
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I
OS02G0822400 Oryza sativa OS02G0822400 I
OS08G0562200 Oryza sativa OS08G0562200 I
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I
Pavir.Ab03009 Panicum virgatum Pavir.Ab03009 I
Pavir.Aa00085 Panicum virgatum Pavir.Aa00085 I
Si013361m.g Setaria italica Si013361m.g I
Si016620m.g Setaria italica Si016620m.g I
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I
Sb07g023900 Sorghum bicolor Sb07g023900 I
Sb04g037720 Sorghum bicolor Sb04g037720 I
Traes_6AL_8BA1FF8B2 Triticum aestivum Traes_6AL_8BA1FF8B2 I
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I
TRIUR3_33524 Triticum urartu TRIUR3_33524 I
GRMZM2G113950 Zea mays GRMZM2G113950 I
GRMZM2G125777 Zea mays GRMZM2G125777 I