CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0P01290
(
Tetrapisispora phaffii
)
GCR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF12550 (GCR1_C)
IPR022210
TPHA_0P01290
T198656_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSN1
M00913_2.00
Saccharomyces cerevisiae
NWWTGTCCHN
NDGGACAWWN
PBM
Gordan et al.(2011)
Msn1
0.709
0.709
MSN1
M08567_2.00
Saccharomyces cerevisiae
GTCCNHAT
ATDNGGAC
Misc
DeBoer et al.(2011)
YOL116W_1376
0.709
0.709
MSN1
M08568_2.00
Saccharomyces cerevisiae
HATGTCCH
DGGACATD
Misc
DeBoer et al.(2011)
YOL116W_1378
0.709
0.709
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE66287
GCR1
263
341
FQFIKSPHSILDLWKEYTEGINGQPSIRELESIYQTGWRRDPAVNKRFSRRKVLYKAIENGLNRGYTLEYIIDLLEDFR
Links
Other
GCR1
family TFs
Other
Tetrapisispora phaffii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HDID_0000481901
Hymenolepis diminuta
HDID_0000481901
I
HmN_000313600
Hymenolepis microstoma
HmN_000313600
I
HNAJ_0000268201
Hymenolepis nana
HNAJ_0000268201
I
SMU15001304
Schmidtea mediterranea
SMU15001304
I