CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OESDEN_22654
(
Oesophagostomum dentatum
)
GCR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF12550 (GCR1_C)
IPR022210
OESDEN_22654
T198784_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OESDEN_22654
GCR1
5
42
PVKNQYFSICELTKQYKDAIRAIRKIKYFVARRRFQQA
OESDEN_22654
GCR1
39
110
FQQARKPYDVRDVLEQYSQGHLNMMVRIKELQRRLDQTLGKPGQDRTSKNPTGASSTIGARLSRIENQVRMM
Links
Other
GCR1
family TFs
Other
Oesophagostomum dentatum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART07G27500
Oryza barthii
OBART07G27500
N
OGLUM07G27460
Oryza glumaepatula
OGLUM07G27460
N
BGIOSGA038100
Oryza indica
BGIOSGA038100
N
OLONG_015950
Oryza longistaminata
OLONG_015950
N
OPUNC07G25890
Oryza punctata
OPUNC07G25890
N
OS07G0695900
Oryza sativa
OS07G0695900
N
Sb01g016710
Sorghum bicolor
Sb01g016710
N