grhl1 (Oryzias latipes)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSORLG00000015232 T199161_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.755 0.755
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.755 0.755
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.755 0.755
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.755 0.755
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.755 0.755
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.736 0.736
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.736 0.736
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.736 0.736
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000019084 Grainyhead 209 428

Links

Other Grainyhead family TFs
Other Oryzias latipes TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF398 Bos taurus ENSBTAG00000020445 I
ZNF398 Callithrix jacchus ENSCJAG00000010213 I
ZNF398 Canis familiaris ENSCAFG00000004429 I
ENSCSAG00000007015 Chlorocebus sabaeus ENSCSAG00000007015 I
ZNF398 Choloepus hoffmanni ENSCHOG00000007407 I
ZNF398 Dasypus novemcinctus ENSDNOG00000038814 I
ZNF398 Gorilla gorilla ENSGGOG00000005812 I
ZNF398 Homo sapiens ENSG00000197024 D
ENSSTOG00000013384 Ictidomys tridecemlineatus ENSSTOG00000013384 I
ENSP00000338984 Macaca fascicularis ENSP00000338984 I
ENSMICG00000016618 Microcebus murinus ENSMICG00000016618 I
ENSMPUG00000006622 Mustela putorius furo ENSMPUG00000006622 I
Zfp398 Mus musculus ENSMUSG00000062519 I
Myotis_brandtii_ZNF398_10025637 Myotis brandtii Myotis_brandtii_ZNF398_10025637 I
ZNF398 Myotis lucifugus ENSMLUG00000007451 I
ENSNLEG00000003700 Nomascus leucogenys ENSNLEG00000003700 I
ZNF398 Ochotona princeps ENSOPRG00000010531 I
ZNF398 Oryctolagus cuniculus ENSOCUG00000008416 I
ZNF398 Otolemur garnettii ENSOGAG00000016740 I
ZNF398 Pan troglodytes ENSPTRG00000023917 I
ENSPANG00000015944 Papio anubis ENSPANG00000015944 I
ENSPPYG00000018150 Pongo abelii ENSPPYG00000018150 I
ZNF398 Pteropus vampyrus ENSPVAG00000010865 I
Zfp398 Rattus norvegicus ENSRNOG00000006703 I
ENSTSYG00000002784 Tarsius syrichta ENSTSYG00000002784 I