XP_002938936 (Xenopus tropicalis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 XP_002938936 T199617_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.929 0.929
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.929 0.929
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.929 0.929
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.929 0.929
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.929 0.929
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.726 0.726
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.722 0.722
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.722 0.722
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002938936 Grainyhead 226 437

Links

Other Grainyhead family TFs
Other Xenopus tropicalis TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_224213 Agaricus bisporus AGABI2DRAFT_224213 N 0.000
BOTBODRAFT_50846 Botryobasidium botryosum BOTBODRAFT_50846 N 0.000
CERSUDRAFT_89102 Ceriporiopsis subvermispora CERSUDRAFT_89102 N 0.000
DICSQDRAFT_163586 Dichomitus squalens DICSQDRAFT_163586 N 0.000
FIBRA_04563 Fibroporia radiculosa FIBRA_04563 N 0.000
FOMPIDRAFT_1031471 Fomitopsis pinicola FOMPIDRAFT_1031471 N 0.000
GALMADRAFT_238181 Galerina marginata GALMADRAFT_238181 N 0.000
GLOTRDRAFT_66280 Gloeophyllum trabeum GLOTRDRAFT_66280 N 0.000
M413DRAFT_444187 Hebeloma cylindrosporum M413DRAFT_444187 N 0.000
HETIRDRAFT_384208 Heterobasidion irregulare HETIRDRAFT_384208 N 0.000
HYDPIDRAFT_182671 Hydnomerulius pinastri HYDPIDRAFT_182671 N 0.000
JAAARDRAFT_30454 Jaapia argillacea JAAARDRAFT_30454 N 0.000
K443DRAFT_672892 Laccaria amethystina K443DRAFT_672892 N 0.000
Moror_12409 Moniliophthora roreri Moror_12409 N 0.000
PAXRUDRAFT_143066 Paxillus rubicundulus PAXRUDRAFT_143066 N 0.000
PHACADRAFT_262394 Phanerochaete carnosa PHACADRAFT_262394 N 0.000
PHLGIDRAFT_126149 Phlebiopsis gigantea PHLGIDRAFT_126149 N 0.000
PILCRDRAFT_812975 Piloderma croceum PILCRDRAFT_812975 N 0.000
PIIN_00682 Piriformospora indica PIIN_00682 N 0.000
PISMIDRAFT_684265 Pisolithus microcarpus PISMIDRAFT_684265 N 0.000
M404DRAFT_248099 Pisolithus tinctorius M404DRAFT_248099 N 0.000
SCHCODRAFT_81726 Schizophyllum commune SCHCODRAFT_81726 N 0.000
M408DRAFT_198102 Serendipita vermifera M408DRAFT_198102 N 0.000
SERLA73DRAFT_55337 Serpula lacrymans SERLA73DRAFT_55337 N 0.000
M422DRAFT_55406 Sphaerobolus stellatus M422DRAFT_55406 N 0.000
CY34DRAFT_21340 Suillus luteus CY34DRAFT_21340 N 0.000
M407DRAFT_30153 Tulasnella calospora M407DRAFT_30153 N 0.000