CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AATE012841
(
Anopheles atroparvus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
AATE012841
T199634_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.896
0.896
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.896
0.896
grh
M10617_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.896
0.896
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AATE012841-PA
Grainyhead
208
352
WHDFGRQNDADKVQIPKIYTDVGFKYYLESPISSSQRREDDRITYINKGQFYGITLEYVHDPDKPLKNQTVKSVIMLLFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLAGCIEEVSHNAIAVYWNPLESSAKVSFR
Links
Other
Grainyhead
family TFs
Other
Anopheles atroparvus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_04514
Aegilops tauschii
F775_04514
N
LPERR03G31200
Leersia perrieri
LPERR03G31200
N
LPERR08G17300
Leersia perrieri
LPERR08G17300
N
OBART08G20460
Oryza barthii
OBART08G20460
N
OB08G27360
Oryza brachyantha
OB08G27360
N
OGLUM03G36620
Oryza glumaepatula
OGLUM03G36620
N
OGLUM08G21760
Oryza glumaepatula
OGLUM08G21760
N
BGIOSGA029005
Oryza indica
BGIOSGA029005
N
BGIOSGA013705
Oryza indica
BGIOSGA013705
N
OMERI02G02130
Oryza meridionalis
OMERI02G02130
N
ONIVA08G23410
Oryza nivara
ONIVA08G23410
N
OPUNC03G33890
Oryza punctata
OPUNC03G33890
N
OPUNC08G18660
Oryza punctata
OPUNC08G18660
N
ORUFI08G22960
Oryza rufipogon
ORUFI08G22960
N
Pavir.Fb01953
Panicum virgatum
Pavir.Fb01953
N
Pavir.J04242
Panicum virgatum
Pavir.J04242
N
Si015521m.g
Setaria italica
Si015521m.g
N
Si039129m.g
Setaria italica
Si039129m.g
N
Sb07g026800
Sorghum bicolor
Sb07g026800
N
Traes_5BL_26B26165E
Triticum aestivum
Traes_5BL_26B26165E
N
TRIUR3_34186
Triticum urartu
TRIUR3_34186
N
GRMZM2G132667
Zea mays
GRMZM2G132667
N