CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g104900
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo4g104900
T199930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g104900.1
GRAS
200
563
ITEQLFNAAGELTGTDNNNPVLAQGILARLNQNLNNNLNNPKPPFQRAALYVTESLQSLLQPSLPPPHTLLLKIAAYRAFSETSPFLQFVNFTANQTILESLERFDRIRIVDFDVGFGGQWSSLIQELANRSSSAPLSSLKITSFSSPSTVSDKFELRFTEENLRAFAGETGVTFEMEMLNMETLLNPPLSLLRSSDKEAIAVNLPISSVISGYLPLILRFLKQISPNVVVCSDTIPDAPFPNAVVDALHYYTSLLESLESPNSSSQEAVASIERFCVQPWIQRLLTNRYRWMDKSPPWRSLFGQCGFTSVAMSQTAETQAEYLLQRNPMRGFHLEKRQSSSFTTSSLVLCWQKKELVAVSAWK
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nfkb2
Danio rerio
ENSDARG00000038687
N
nfkb2
Gasterosteus aculeatus
ENSGACG00000001323
N
ENSLOCG00000012413
Lepisosteus oculatus
ENSLOCG00000012413
N
ENSONIG00000007023
Oreochromis niloticus
ENSONIG00000007023
N
nfkb2
Oryzias latipes
ENSORLG00000002942
N
ENSPFOG00000012589
Poecilia formosa
ENSPFOG00000012589
N
nfkb2
Takifugu rubripes
ENSTRUG00000004360
N
nfkb2
Tetraodon nigroviridis
ENSTNIG00000013359
N
ENSXMAG00000000193
Xiphophorus maculatus
ENSXMAG00000000193
N