CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra012102
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra012102
T199976_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra012102.1-P
GRAS
1
168
MLQLYKLLDETPAVFDTALRLARSLNPMVVTLGEYDVSLNRVGFANRVKNALHFYSAVFESLEPSLGRDSEERLRVERVMFGRTISGLIGPEITGNQRLRMEGKEQWRVLMENAGFESVKLSNYAVSQAEILLWNYNYSSLYSIVESKPGFVSLAWNDLPLLAVSSWR
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_113833
Agaricus bisporus
AGABI2DRAFT_113833
N
ALUE_0000265801
Ascaris lumbricoides
ALUE_0000265801
N
ENSAMXG00000009040
Astyanax mexicanus
ENSAMXG00000009040
N
D915_05490
Fasciola hepatica
D915_05490
N
LLOJ008226
Lutzomyia longipalpis
LLOJ008226
N
augustus_masked-nMf.1.1.scaf17864-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf17864-processed-gene-0.0
N
SPER_0001328101
Spirometra erinaceieuropaei
SPER_0001328101
N