CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM04G22640
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM04G22640
T200705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G22640.1
GRAS
261
619
SRQLLSEAAAAIADGHNETAATHLTALKRAANSRGDVEQRLVAMMVAALSSRIGQTASVPDICGGETRAGSQLLHDISPCFRLALHAANVAIVDAVGDHRAIHLVDFDVSAPQHADLIRCLAARRLPGTSLKVTAVTDPASPFTQSVTATLHLQKLAERAGIDYRFKMVSCRAGEIEASKLGCEAGEALAVNLAFALSHVPDESVSPANPRDEILRRVRALGPQVVALVEQELNSNTAPLTTRFTDACAHYGAILESLDATIPRESAERARAEAALGGRAANAVAREGADRLERCEVFGKWRSRFGMAGFRPVALGPGIADQVLARQGPVAAGFAVKAENGVLRLGWMGRVVTVASAWR
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G19190
Brachypodium distachyon
BRADI5G19190
N
0.774
MLOC_72117
Hordeum vulgare
MLOC_72117
N
0.762
LPERR04G18520
Leersia perrieri
LPERR04G18520
N
0.886
OBART02G28020
Oryza barthii
OBART02G28020
N
0.713
OBART04G22740
Oryza barthii
OBART04G22740
N
0.769
OB04G29620
Oryza brachyantha
OB04G29620
N
0.855
ORGLA04G0197700
Oryza glaberrima
ORGLA04G0197700
N
1.000
ORGLA02G0240700
Oryza glaberrima
ORGLA02G0240700
N
0.713
OGLUM02G28580
Oryza glumaepatula
OGLUM02G28580
N
0.710
BGIOSGA014504
Oryza indica
BGIOSGA014504
N
1.000
BGIOSGA005839
Oryza indica
BGIOSGA005839
N
0.710
OLONG_005829
Oryza longistaminata
OLONG_005829
N
0.727
OMERI02G27200
Oryza meridionalis
OMERI02G27200
N
0.713
OMERI04G19030
Oryza meridionalis
OMERI04G19030
N
0.967
ONIVA04G21910
Oryza nivara
ONIVA04G21910
N
1.000
ONIVA02G31120
Oryza nivara
ONIVA02G31120
N
0.710
OPUNC02G25720
Oryza punctata
OPUNC02G25720
N
0.713
OPUNC04G20350
Oryza punctata
OPUNC04G20350
N
0.930
ORUFI02G29540
Oryza rufipogon
ORUFI02G29540
N
0.713
ORUFI04G24440
Oryza rufipogon
ORUFI04G24440
N
1.000
OS02G0681900
Oryza sativa
OS02G0681900
N
0.713
OS04G0580300
Oryza sativa
OS04G0580300
N
1.000
Pavir.Ga00626
Panicum virgatum
Pavir.Ga00626
N
0.780
Pavir.Gb01009
Panicum virgatum
Pavir.Gb01009
N
0.772
Pavir.J39953
Panicum virgatum
Pavir.J39953
N
0.708
Si009601m.g
Setaria italica
Si009601m.g
N
0.774
Si016627m.g
Setaria italica
Si016627m.g
N
0.708
Sb06g026240
Sorghum bicolor
Sb06g026240
N
0.749
Traes_2BL_46E59998A1
Triticum aestivum
Traes_2BL_46E59998A1
N
0.747
GRMZM2G173429
Zea mays
GRMZM2G173429
N
0.763
GRMZM2G109869
Zea mays
GRMZM2G109869
N
0.749