CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI11G03580
(
Oryza meridionalis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OMERI11G03580
T200815_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI11G03580.1
GRAS
47
399
LSGLLLAGAEAVEAGDSILASVAFLRLDDFLSGIPENGATSSFNRLAYHFNQGLRSRMSSASTECYQPEPLPSGNMLVHQIIQELSPFVKFAHFTTNQAILDATDGDMDVHVVDLNIGEGIQWSSLMSDLARCGGKSFRLTAITTHADCDASTHDTVVRLLSEFADSLELPFQYNSICVHNEDELHAFFEDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEEDLVRIGRGASPSSASFIEFFFEALHHFTTVFESMASCFIGSNYEPCLRLVEMELLGPRIQDFVVKYGSVRVEANASEVLEGFMACELSACNIAQARMLVGLFNRVFGVVFKKISLLMVY
Links
Other
GRAS
family TFs
Other
Oryza meridionalis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR11G10810
Leersia perrieri
LPERR11G10810
N
OBART11G03940
Oryza barthii
OBART11G03940
N
OB11G20720
Oryza brachyantha
OB11G20720
N
ORGLA11G0036700
Oryza glaberrima
ORGLA11G0036700
N
OGLUM11G03660
Oryza glumaepatula
OGLUM11G03660
N
BGIOSGA034453
Oryza indica
BGIOSGA034453
N
OLONG_001369
Oryza longistaminata
OLONG_001369
N
OLONG_001596
Oryza longistaminata
OLONG_001596
N
OMERI11G03590
Oryza meridionalis
OMERI11G03590
N
OMERI11G11300
Oryza meridionalis
OMERI11G11300
N
ONIVA11G04050
Oryza nivara
ONIVA11G04050
N
OPUNC11G11410
Oryza punctata
OPUNC11G11410
N
OPUNC11G03660
Oryza punctata
OPUNC11G03660
N
ORUFI11G03870
Oryza rufipogon
ORUFI11G03870
N
OS11G0160700
Oryza sativa
OS11G0160700
N
Pavir.Bb00513
Panicum virgatum
Pavir.Bb00513
N
Si016246m.g
Setaria italica
Si016246m.g
N
Sb01g000725
Sorghum bicolor
Sb01g000725
N
TRAES3BF135900030CFD_g
Triticum aestivum
TRAES3BF135900030CFD_g
N