CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0842200
(
Oryza sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OS01G0842200
T201054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0842200-01
GRAS
443
813
LETLLIHCAQSVATDDRRSATELLKQIRQHAHANGDGDQRLAHCFANGLEARLAGTGSQIYKNYTITRLPCTDVLKAYQLYLAACPFKKISHYFANQTILNAVEKAKKVHIVDYGIYYGFQWPCLIQRLSNRPGGPPKLRITGIDTPQPGFRPAERTEETGRYLSDYAQTFNVPFEFQAIASRFEAVRMEDLHIEEDEVLIVNCMFKFKNLMDESVVAESPRNMALKTIRKMNPHVFIHGVVNGSYNAPFFVTRFREALFHYSAIFDMLETNIPKDNEQRLLIESALFSREAINVISCEGLERMERPETYKQWQVRNQRVGFKQLPLNQDMMKRAREKVRCYHKDFIIDEDNRWLLQGWKGRILFALSTWK
OS01T0842200-02
GRAS
431
801
LETLLIHCAQSVATDDRRSATELLKQIRQHAHANGDGDQRLAHCFANGLEARLAGTGSQIYKNYTITRLPCTDVLKAYQLYLAACPFKKISHYFANQTILNAVEKAKKVHIVDYGIYYGFQWPCLIQRLSNRPGGPPKLRITGIDTPQPGFRPAERTEETGRYLSDYAQTFNVPFEFQAIASRFEAVRMEDLHIEEDEVLIVNCMFKFKNLMDESVVAESPRNMALKTIRKMNPHVFIHGVVNGSYNAPFFVTRFREALFHYSAIFDMLETNIPKDNEQRLLIESALFSREAINVISCEGLERMERPETYKQWQVRNQRVGFKQLPLNQDMMKRAREKVRCYHKDFIIDEDNRWLLQGWKGRILFALSTWK
Links
Other
GRAS
family TFs
Other
Oryza sativa
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_008_00101
Aquilegia coerulea
Aquca_008_00101
N
0.000
FRS11
Arabidopsis thaliana
AT1G10240
N
0.000
Bostr.13671s0465
Boechera stricta
Bostr.13671s0465
N
0.000
BRADI5G11330
Brachypodium distachyon
BRADI5G11330
N
0.000
Bo5g010680
Brassica oleracea
Bo5g010680
N
0.000
PK06148.1
Cannabis sativa
PK06148.1
N
0.000
Cagra.4395s0212
Capsella grandiflora
Cagra.4395s0212
N
0.000
Carubv10012599m.g
Capsella rubella
Carubv10012599m.g
N
0.000
evm.TU.supercontig_113.2
Carica papaya
evm.TU.supercontig_113.2
N
0.000
Ciclev10000456m.g
Citrus clementina
Ciclev10000456m.g
N
0.000
orange1.1g047253m.g
Citrus sinensis
orange1.1g047253m.g
N
0.000
Cucsa.019230
Cucumis sativus
Cucsa.019230
N
0.000
Eucgr.G00085
Eucalyptus grandis
Eucgr.G00085
N
0.000
Thhalv10006984m.g
Eutrema salsugineum
Thhalv10006984m.g
N
0.000
gene29088-v1.0-hybrid
Fragaria vesca
gene29088-v1.0-hybrid
N
0.000
GLYMA10G00380
Glycine max
GLYMA10G00380
N
0.000
Gorai.006G118900
Gossypium raimondii
Gorai.006G118900
N
0.000
MLOC_15705
Hordeum vulgare
MLOC_15705
N
0.000
MDP0000234814
Malus domestica
MDP0000234814
N
0.000
cassava25471.m1
Manihot esculenta
cassava25471.m1
N
0.000
OB04G20960
Oryza brachyantha
OB04G20960
N
0.000
BGIOSGA012540
Oryza indica
BGIOSGA012540
N
0.000
OS04G0443000
Oryza sativa
OS04G0443000
N
0.000
PDK_20s1756181g001
Phoenix dactylifera
PDK_20s1756181g001
N
0.000
POPTR_0004s23620
Populus trichocarpa
POPTR_0004s23620
N
0.000
Pm003854
Prunus mume
Pm003854
N
0.000
PRUPE_ppa002379mg
Prunus persica
PRUPE_ppa002379mg
N
0.000
29685.m000503
Ricinus communis
29685.m000503
N
0.000
SapurV1A.0225s0240
Salix purpurea
SapurV1A.0225s0240
N
0.000
Si012297m.g
Setaria italica
Si012297m.g
N
0.000
Solyc01g103180.2
Solanum lycopersicum
Solyc01g103180.2
N
0.000
Sb06g017580
Sorghum bicolor
Sb06g017580
N
0.000
TCM_041141
Theobroma cacao
TCM_041141
N
0.000
Traes_2BL_C1DE13045
Triticum aestivum
Traes_2BL_C1DE13045
N
0.000
Traes_2AL_9A4A7514E
Triticum aestivum
Traes_2AL_9A4A7514E
N
0.000
TRIUR3_11057
Triticum urartu
TRIUR3_11057
N
0.000
VIT_12s0035g01360
Vitis vinifera
VIT_12s0035g01360
N
0.000