CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s01720
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0006s01720
T201199_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s01720.1
GRAS
176
546
LKHVLLACADAVSNADIQRSAGLMHVLDQMVSVSGEPIQRLGAYMLEGLRARLELSGSKIYRALKCEAPISSDLMTYMGILYQICPYWKFAYTSANVVIREAVEYEPRIHIIDFQIAQGSQWILLMQMLACRPGGPPAIHITGVDDSQSADARGGGLDIVGQRLSKVAESCNVPFEFHDVAMDGCEVQLEHLRVQPGEAVVVNFPYVLHHMPDESVNTWNHRDRLIRMVKSLSPRIVTLIEQESNTNTKPFFPRFIETLDYYAAMFESIAAGSSMDFKQRINAEQQCVARDIVNMIACEEAERVERHELLAKWRSRFTMAGFNQYPLGSSATTAVKDLLKEYHRDYSVQERDWALYLRWRDRDMATSSAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI085083
Acyrthosiphon pisum
ACYPI085083
N
F775_07927
Aegilops tauschii
F775_07927
N
F775_29735
Aegilops tauschii
F775_29735
N
BOTBODRAFT_29480
Botryobasidium botryosum
BOTBODRAFT_29480
N
MLOC_17065
Hordeum vulgare
MLOC_17065
N
MLOC_32526
Hordeum vulgare
MLOC_32526
N
MLOC_73670
Hordeum vulgare
MLOC_73670
N
LCUP013620
Lucilia cuprina
LCUP013620
N
LCUP013573
Lucilia cuprina
LCUP013573
N
LCUP009465
Lucilia cuprina
LCUP009465
N
LCUP009513
Lucilia cuprina
LCUP009513
N
LCUP013373
Lucilia cuprina
LCUP013373
N
LCUP013541
Lucilia cuprina
LCUP013541
N
L892_g29473
Steinernema scapterisci
L892_g29473
N
TTRE_0000731701
Trichuris trichiura
TTRE_0000731701
N
Traes_2DS_1FBA5F748
Triticum aestivum
Traes_2DS_1FBA5F748
N
Traes_2BS_E2EDA1CE91
Triticum aestivum
Traes_2BS_E2EDA1CE91
N
TRIUR3_31540
Triticum urartu
TRIUR3_31540
N
TRIUR3_30002
Triticum urartu
TRIUR3_30002
N