CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0010s12080
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0010s12080
T201218_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s12080.1
GRAS
232
591
LVHLLMACAEAVQENNLNLAEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYKLYPQNSTDHSLSDILQIHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAHDNTDQLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPTEFESVAVNSIFEFHKLLAIPGAMKKVLSVVKQMKPEIVTVVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGSVSTQDKVMSEVYLAKQICNVVACEGSSRVERHETLTQWRTRLSSAGFAPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_154166
Bipolaris maydis
COCC4DRAFT_154166
N
0.000
COCSADRAFT_179707
Bipolaris sorokiniana
COCSADRAFT_179707
N
0.000
COCVIDRAFT_114130
Bipolaris victoriae
COCVIDRAFT_114130
N
0.000
COCVIDRAFT_115451
Bipolaris victoriae
COCVIDRAFT_115451
N
0.000
COCCADRAFT_30911
Bipolaris zeicola
COCCADRAFT_30911
N
0.000
SETTUDRAFT_161052
Setosphaeria turcica
SETTUDRAFT_161052
N
0.000
SETTUDRAFT_166763
Setosphaeria turcica
SETTUDRAFT_166763
N
0.000