CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g035680
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb02g035680
T201324_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g035680.1
GRAS
199
570
VKQLLTKCAEALSEERIEEFLTLVQQARGVVSITGEPIQRLGAYLLEGLVARHANSGTNIYRALKCREPESNELLSYMKILYNICPYFKFGYMAANGAIAEALRNEDKIHIIDFQIAQGTQWITLIQALAAKPGGPPHVRITGIDDPVSEYARGEGLDLVGKMLKSMSEEFRIPLEFTPLPGIYATQVTKEMLDIRPGEALAVNFTLQLHHTPDESVDVSNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFTETLDYYSAMFESIDANLPRENKERINVEQHCLAKDIVNIIACEGKDRVERHELLGKWRSRLTMAGFRPYPLSSYVNSVIRNLLAYYSDKYTLEEKDGAMLLGWKNRKLISASAWH
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_07373
Aegilops tauschii
F775_07373
N
0.895
AMTR_s00043p00136400
Amborella trichopoda
AMTR_s00043p00136400
N
0.741
Aquca_005_00404
Aquilegia coerulea
Aquca_005_00404
N
0.708
BRADI1G25370
Brachypodium distachyon
BRADI1G25370
N
0.902
PK07026.1
Cannabis sativa
PK07026.1
N
0.743
Ca_06943
Cicer arietinum
Ca_06943
N
0.735
Ciclev10007843m.g
Citrus clementina
Ciclev10007843m.g
N
0.730
Cucsa.053270
Cucumis sativus
Cucsa.053270
N
0.749
Eucgr.F03414
Eucalyptus grandis
Eucgr.F03414
N
0.743
gene03285-v1.0-hybrid
Fragaria vesca
gene03285-v1.0-hybrid
N
0.759
GLYMA13G36120
Glycine max
GLYMA13G36120
N
0.756
GLYMA12G16750
Glycine max
GLYMA12G16750
N
0.743
GLYMA06G41500
Glycine max
GLYMA06G41500
N
0.756
GLYMA12G34420
Glycine max
GLYMA12G34420
N
0.746
Gorai.002G080600
Gossypium raimondii
Gorai.002G080600
N
0.741
Gorai.009G427800
Gossypium raimondii
Gorai.009G427800
N
0.719
Gorai.013G164700
Gossypium raimondii
Gorai.013G164700
N
0.749
MLOC_37712
Hordeum vulgare
MLOC_37712
N
0.908
LPERR07G15240
Leersia perrieri
LPERR07G15240
N
0.755
Lus10035840.g
Linum usitatissimum
Lus10035840.g
N
0.719
Lus10036623.g
Linum usitatissimum
Lus10036623.g
N
0.703
MDP0000205622
Malus domestica
MDP0000205622
N
0.743
cassava24578.valid.m1
Manihot esculenta
cassava24578.valid.m1
N
0.748
MTR_2g082090
Medicago truncatula
MTR_2g082090
N
0.738
mgf007614m
Mimulus guttatus
mgf007614m
N
0.749
GSMUA_Achr6G24310_001
Musa acuminata
GSMUA_Achr6G24310_001
N
0.797
OBART07G17780
Oryza barthii
OBART07G17780
N
0.905
OB07G23640
Oryza brachyantha
OB07G23640
N
0.914
ORGLA07G0142600
Oryza glaberrima
ORGLA07G0142600
N
0.905
OGLUM07G17420
Oryza glumaepatula
OGLUM07G17420
N
0.908
BGIOSGA025902
Oryza indica
BGIOSGA025902
N
0.908
OLONG_024541
Oryza longistaminata
OLONG_024541
N
0.908
OMERI07G14660
Oryza meridionalis
OMERI07G14660
N
0.905
ONIVA07G16090
Oryza nivara
ONIVA07G16090
N
0.908
OPUNC07G16570
Oryza punctata
OPUNC07G16570
N
0.916
ORUFI07G18480
Oryza rufipogon
ORUFI07G18480
N
0.908
CIGR1
Oryza sativa
OS07G0545800
N
0.905
Pavir.J35699
Panicum virgatum
Pavir.J35699
N
0.951
Pavir.Bb02923
Panicum virgatum
Pavir.Bb02923
N
0.951
POPTR_0001s44090
Populus trichocarpa
POPTR_0001s44090
N
0.732
POPTR_0011s13460
Populus trichocarpa
POPTR_0011s13460
N
0.738
Pm029452
Prunus mume
Pm029452
N
0.753
PRUPE_ppa003323mg
Prunus persica
PRUPE_ppa003323mg
N
0.762
SapurV1A.0327s0070
Salix purpurea
SapurV1A.0327s0070
N
0.710
SapurV1A.3085s0020
Salix purpurea
SapurV1A.3085s0020
N
0.732
Si029156m.g
Setaria italica
Si029156m.g
N
0.959
Solyc07g063940.1
Solanum lycopersicum
Solyc07g063940.1
N
0.722
Solyc12g005340.1
Solanum lycopersicum
Solyc12g005340.1
N
0.718
PGSC0003DMG400021802
Solanum tuberosum
PGSC0003DMG400021802
N
0.714
PGSC0003DMG400019232
Solanum tuberosum
PGSC0003DMG400019232
N
0.722
TCM_031132
Theobroma cacao
TCM_031132
N
0.746
Traes_2AS_620B821281
Triticum aestivum
Traes_2AS_620B821281
N
0.892
Traes_2DS_2D035BAFD
Triticum aestivum
Traes_2DS_2D035BAFD
N
0.895
Traes_2BS_4600D4B54
Triticum aestivum
Traes_2BS_4600D4B54
N
0.900
TRIUR3_35245
Triticum urartu
TRIUR3_35245
N
0.897
VIT_19s0014g04940
Vitis vinifera
VIT_19s0014g04940
N
0.770
GRMZM5G821439
Zea mays
GRMZM5G821439
N
0.973