CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAT1
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
scaffold_801100.1
T201394_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_801100.1
GRAS
119
490
LRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNKCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
lola
Drosophila melanogaster
FBgn0005630
D
GI20176
Drosophila mojavensis
FBgn0142912
N
GA30442
Drosophila pseudoobscura
FBgn0264579
I
GM20504
Drosophila sechellia
FBgn0175386
N
GD25966
Drosophila simulans
FBgn0197243
N
MESCA003190
Megaselia scalaris
MESCA003190
N