CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si012046m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si012046m.g
T201496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si012046m
GRAS
244
610
IRTTLILCAQAVAANDDMTASELLKQIKQHASETGDVTQRLAQCFAKGLEARLVGMGSQVWQLWQLRMADRLSIVELLEARNLYAAACSFNKVVLLFSTMTILQAMVGKGRLHIVDYDLLRLLASREGGPPKVKITAIGPPNLRPCPTEQIEEIGYRLSKCAHEFGVPFNFYAIRKKWEEVSIEDLNTDAGEVLIVNDRLNFNSLMDESIFFDDPSPKDIVLHNIRKMRPAIFIQSIVNSSYGSSYLSRFREVVFYFSAIFDLFDATIPRDSKLRVVLEQDLFGGLALNAIACEGTDLMNRPEKYKQWHARNQRAGLRQLPLKPSIVNALKDEVMRCYHRDFLICEDGQWLLQGWMGRILFAQSTWV
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000018448
Ailuropoda melanoleuca
ENSAMEG00000018448
I
MECP2
Anolis carolinensis
ENSACAG00000012519
I
ENSAMXG00000017019
Astyanax mexicanus
ENSAMXG00000017019
I
ENSP00000395535-D1
Bos grunniens
ENSP00000395535-D1
I
MECP2
Bos taurus
ENSBTAG00000047855
I
MECP2
Callithrix jacchus
ENSCJAG00000016796
I
MECP2
Canis familiaris
ENSCAFG00000019440
I
MECP2
Cavia porcellus
ENSCPOG00000012579
I
Cmyd_10000498
Chelonia mydas
Cmyd_10000498
I
ENSCSAG00000006798
Chlorocebus sabaeus
ENSCSAG00000006798
I
mecp2
Danio rerio
ENSDARG00000014218
I
MECP2
Dasypus novemcinctus
ENSDNOG00000013419
I
Mecp2
Dipodomys ordii
ENSDORG00000014978
I
MECP2
Equus caballus
ENSECAG00000018208
I
ENSEEUG00000015025
Erinaceus europaeus
ENSEEUG00000015025
I
MECP2
Felis catus
ENSFCAG00000011389
I
mecp2
Gasterosteus aculeatus
ENSGACG00000000798
I
MECP2
Gorilla gorilla
ENSGGOG00000000222
I
MECP2
Homo sapiens
ENSG00000169057
D
ENSSTOG00000006094
Ictidomys tridecemlineatus
ENSSTOG00000006094
I
ENSLACG00000011281
Latimeria chalumnae
ENSLACG00000011281
I
ENSLOCG00000014725
Lepisosteus oculatus
ENSLOCG00000014725
I
MECP2
Loxodonta africana
ENSLAFG00000016292
I
ENSP00000395535
Macaca fascicularis
ENSP00000395535
I
MECP2
Macaca mulatta
ENSMMUG00000018704
I
ENSMEUG00000002761
Macropus eugenii
ENSMEUG00000002761
I
MECP2
Microcebus murinus
ENSMICG00000005149
I
MECP2
Monodelphis domestica
ENSMODG00000011643
I
ENSMPUG00000009072
Mustela putorius furo
ENSMPUG00000009072
I
Mecp2
Mus musculus
ENSMUSG00000031393
D
Myotis_brandtii_IRAK1_10010673
Myotis brandtii
Myotis_brandtii_IRAK1_10010673
I
MECP2
Myotis lucifugus
ENSMLUG00000014297
I
ENSNLEG00000013783
Nomascus leucogenys
ENSNLEG00000013783
I
Ogr09995
Ophisaurus gracilis
Ogr09995
I
ENSONIG00000000809
Oreochromis niloticus
ENSONIG00000000809
I
MECP2
Ornithorhynchus anatinus
ENSOANG00000011024
I
MECP2
Oryctolagus cuniculus
ENSOCUG00000013147
I
mecp2
Oryzias latipes
ENSORLG00000020117
I
MECP2
Otolemur garnettii
ENSOGAG00000015115
I
ENSOARG00000005806
Ovis aries
ENSOARG00000005806
I
MECP2
Pan troglodytes
ENSPTRG00000022424
I
ENSPANG00000011691
Papio anubis
ENSPANG00000011691
I
ENSPSIG00000002254
Pelodiscus sinensis
ENSPSIG00000002254
I
ENSPFOG00000002307
Poecilia formosa
ENSPFOG00000002307
I
Pvit_16673
Pogona vitticeps
Pvit_16673
I
ENSPPYG00000020866
Pongo abelii
ENSPPYG00000020866
I
MECP2
Procavia capensis
ENSPCAG00000011826
I
Mecp2
Rattus norvegicus
ENSRNOG00000056659
I
ENSSHAG00000007851
Sarcophilus harrisii
ENSSHAG00000007851
I
MECP2
Sorex araneus
ENSSARG00000012925
I
ENSSSCG00000012796
Sus scrofa
ENSSSCG00000012796
I
mecp2
Takifugu rubripes
ENSTRUG00000006419
I
ENSTSYG00000007420
Tarsius syrichta
ENSTSYG00000007420
I
mecp2
Tetraodon nigroviridis
ENSTNIG00000005114
I
MECP2
Tursiops truncatus
ENSTTRG00000004653
I
mecp2.S
Xenopus laevis
XB-GENE-494744
I
mecp2
Xenopus tropicalis
XB-GENE-494740
I
ENSXMAG00000003522
Xiphophorus maculatus
ENSXMAG00000003522
I