CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm015021
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm015021
T201970_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm015021
GRAS
168
538
LKQVLIFCAKAVADNDLLLAQWMMDELRQMVSVSGEPIQRLGAYLLEGLVARRASSGSNIYKALRCKEPASSELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDENSVHIIDFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSMSAYARGGGLNIVGKRLSKLAELFKVPFEFHAAAMSGCEVQLKHLGVRPGEALAMNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVTLPRDHKERINVEQHCLAREVVNIIACEGVERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSDKYRLQERDGALYLGWKNRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_05988
Ancylostoma caninum
ANCCAN_05988
N
0.000
ANCCEY_03973
Ancylostoma ceylanicum
ANCCEY_03973
N
0.000
ACOC_0000088801
Angiostrongylus costaricensis
ACOC_0000088801
N
0.000
ASIM_0001591201
Anisakis simplex
ASIM_0001591201
N
0.000
ALUE_0001621101
Ascaris lumbricoides
ALUE_0001621101
N
0.000
CBN14148
Caenorhabditis brenneri
CBN14148
N
0.000
CBG17628
Caenorhabditis briggsae
CBG17628
N
0.000
CJA36291
Caenorhabditis japonica
CJA36291
N
0.000
CGOC_0000108301
Cylicostephanus goldi
CGOC_0000108301
N
0.000
Hba_00666
Heterorhabditis bacteriophora
Hba_00666
N
0.000
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
N
0.000
PPA10006
Pristionchus pacificus
PPA10006
N
0.000
L596_g25846
Steinernema carpocapsae
L596_g25846
N
0.000
L889_g3780
Steinernema feltiae
L889_g3780
N
0.000
L892_g10684
Steinernema scapterisci
L892_g10684
N
0.000
TCNE_0001343401
Toxocara canis
TCNE_0001343401
N
0.000