CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29916.m000544
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
29916.m000544
T202023_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29916.m000544
GRAS
425
786
LLDQLYKAAELVGTGNFSHAQGILARLNQQLSPIGKPLHRAAFYFKEALQLLLLMNNNPVTSLPPRSPTPFDVIFKLGAYKVFSEVSPLIQFVNFTCNQALLEALSEADRIHIIDFDIGFGAQWASFMQELPRNRGAPSLKITAFASPSTHHPVEVLLMRENLTQFANEIGISFELDVINFDSLEQSCYSLPIFRSKENEAIAVHFPVWSASNQPAALPSLLRFVKQLSPKIVVSLDRGDRTDLPFPQHILHALQSHILLLESLDAVNVASDAVNKIEKFLLQPRIESTVLGRLRAPDKMPTWKTIFASAGFSPVTFSNFTETQAECVVKRTPVRGFHVEKRQASLVLCWQRRDLISASAWR
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CAGL0F05995g
Candida glabrata
CAGL0F05995g
D
CAGL0M13189g
Candida glabrata
CAGL0M13189g
D
G210_5389
Candida maltosa
G210_5389
I
CTRG_03253
Candida tropicalis
CTRG_03253
I
Ecym_2301
Eremothecium cymbalariae
Ecym_2301
I
KAFR_0A02320
Kazachstania africana
KAFR_0A02320
I
KAFR_0F02070
Kazachstania africana
KAFR_0F02070
I
KNAG_0H00550
Kazachstania naganishii
KNAG_0H00550
I
KNAG_0M02310
Kazachstania naganishii
KNAG_0M02310
I
KLLA0_F26961g
Kluyveromyces lactis
KLLA0_F26961g
D
KLTH0D08734g
Kluyveromyces thermotolerans
KLTH0D08734g
I
Kwal_8351
Kluyveromyces waltii
Kwal_8351
I
SAKL0B11330g
Lachancea kluyveri
SAKL0B11330g
I
LALA0_S09e05358g
Lachancea lanzarotensis
LALA0_S09e05358g
I
KLTH0D08734g
Lachancea thermotolerans
KLTH0D08734g
I
NCAS_0A12910
Naumovozyma castellii
NCAS_0A12910
I
NCAS_0H03080
Naumovozyma castellii
NCAS_0H03080
I
NDAI_0B01340
Naumovozyma dairenensis
NDAI_0B01340
I
NDAI_0C00560
Naumovozyma dairenensis
NDAI_0C00560
I
SU7_2517
Saccharomyces arboricola
SU7_2517
I
SU7_1995
Saccharomyces arboricola
SU7_1995
I
17588_YMR037C
Saccharomyces bayanus
17588_YMR037C
I
14538_YKL062W
Saccharomyces bayanus
14538_YKL062W
I
Scas_Contig709.32
Saccharomyces castellii
Scas_Contig709.32
I
Scas_Contig649.29
Saccharomyces castellii
Scas_Contig649.29
I
Scas_Contig649.28
Saccharomyces castellii
Scas_Contig649.28
I
MSN4
Saccharomyces cerevisiae
YKL062W
D
MSN2
Saccharomyces cerevisiae
YMR037C
D
SKUD_158203
Saccharomyces kudriavzevii
SKUD_158203
I
16548_YMR037C
Saccharomyces mikatae
16548_YMR037C
I
13440_YKL062W
Saccharomyces mikatae
13440_YKL062W
I
17169_YMR037C
Saccharomyces paradoxus
17169_YMR037C
I
13715_YKL062W
Saccharomyces paradoxus
13715_YKL062W
I
AACERI_AaceriABR089C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABR089C
I
TBLA_0H02830
Tetrapisispora blattae
TBLA_0H02830
I
TBLA_0G01920
Tetrapisispora blattae
TBLA_0G01920
I
TPHA_0N01460
Tetrapisispora phaffii
TPHA_0N01460
I
TPHA_0C02580
Tetrapisispora phaffii
TPHA_0C02580
I
TDEL_0B06910
Torulaspora delbrueckii
TDEL_0B06910
I
Kpol_185p3
Vanderwaltozyma polyspora
Kpol_185p3
I
Kpol_1013p21
Vanderwaltozyma polyspora
Kpol_1013p21
I
BN7_2125
Wickerhamomyces ciferrii
BN7_2125
I
ZBAI_08525
Zygosaccharomyces bailii
ZBAI_08525
I
ZBAI_03527
Zygosaccharomyces bailii
ZBAI_03527
I
ZYRO0F01012g
Zygosaccharomyces rouxii
ZYRO0F01012g
I