CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp_gw1.C_1300022
(
Physcomitrella patens
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
estExt_gwp_gw1.C_1300022
T202166_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp_gw1.C_1300022
GRAS
73
437
LVHMLLACAEAIEKSDFNKAKPILDQLLRSSDPYGDPMQRIALYFGEALTDHLAGVVSPSETHLLSDSKLAYQAFYKVLPFAKFSHVTANQTIYEAVVRSQNVHVVDLDIQLGLQWPCFIQSLAMRPGGAPHLRISAIGTNAENLQTTKRRLSEFAEALKVPFEFTPVLSSLENLTAAMLDIRSEEDLAINCSQVLHTLSGEEAVLDKLLSMFHNLKPNVVTLLEAEANHNGASFIARFVEALHYYCALFDSLEGALGRDSADRYHIESTALAAEIKEIVAFKGNRRRVRHVRSETWRGLFAKAGFLSMAFSSYTVQQAQMLLEVLTSKPMQQANATMPYKLSQESTSLILGWQETPVIGVSAWT
Links
Other
GRAS
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_23625
Ancylostoma caninum
ANCCAN_23625
N
ANCDUO_20174
Ancylostoma duodenale
ANCDUO_20174
I
ASIM_0001696801
Anisakis simplex
ASIM_0001696801
N
Bm5024
Brugia malayi
Bm5024
I
DICVIV_00922
Dictyocaulus viviparus
DICVIV_00922
N
nDi.2.2.2.g11480
Dirofilaria immitis
nDi.2.2.2.g11480
N
EVEC_0001110501
Enterobius vermicularis
EVEC_0001110501
I
GPUH_0002448101
Gongylonema pulchrum
GPUH_0002448101
N
HCOI00799800
Haemonchus contortus
HCOI00799800
I
HCOI01824000
Haemonchus contortus
HCOI01824000
I
HPLM_0001215301
Haemonchus placei
HPLM_0001215301
I
nLs.2.1.2.g05094
Litomosoides sigmodontis
nLs.2.1.2.g05094
N
LOAG_13494
Loa loa
LOAG_13494
N
NECAME_07739
Necator americanus
NECAME_07739
I
NBR_0000066801
Nippostrongylus brasiliensis
NBR_0000066801
I
OFLC_0001531301
Onchocerca flexuosa
OFLC_0001531301
N
nOo.2.0.1.g09824
Onchocerca ochengi
nOo.2.0.1.g09824
N
WBGene00244521
Onchocerca volvulus
WBGene00244521
I
PEQ_0001309401
Parascaris equorum
PEQ_0001309401
N
RSKR_0000081800
Rhabditophanes kr3021
RSKR_0000081800
N
L596_g9976
Steinernema carpocapsae
L596_g9976
I
L889_g22574
Steinernema feltiae
L889_g22574
I
L893_g28279
Steinernema glaseri
L893_g28279
I
L898_g8569
Steinernema monticolum
L898_g8569
I
SSTP_0000359900
Strongyloides stercoralis
SSTP_0000359900
I
WUBG_10304
Wuchereria bancrofti
WUBG_10304
N