CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1317s0069
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.1317s0069
T202318_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1317s0069.1.p
GRAS
229
603
LRSLLTQCAQAVASFDQRRATEKLKEIRSHSSSDGDGTQRLAFYFAEALEARITGNIPPPVSSPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMTATTLHIVDFGVLYGFQWPCLLLALSKRPGGPPKLRITGIELPQSGFRPSDRVEETGRRLKRFCDKFNVPFEFNFIAKKWESISLDEIVINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHFSSLFDMFDTTIQAEDEYKNRALLEKELLVRDAMSVISSEGAERFARPETYKQWRVRILRAGFKSATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWK
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG011191.1
Alligator sinensis
Alligator_sinensis_CCG011191.1
N
ENSAPLG00000010349
Anas platyrhynchos
ENSAPLG00000010349
N
ZNF532
Callithrix jacchus
ENSCJAG00000003543
N
ZNF532
Canis familiaris
ENSCAFG00000000103
N
ZNF532
Cavia porcellus
ENSCPOG00000005888
N
ZNF532
Equus caballus
ENSECAG00000014565
N
ZNF532
Felis catus
ENSFCAG00000013988
N
ENSFALG00000009766
Ficedula albicollis
ENSFALG00000009766
N
ENSGALG00000002852
Gallus gallus
ENSGALG00000002852
N
ENSP00000338217
Macaca fascicularis
ENSP00000338217
N
ENSMMUG00000001245
Macaca mulatta
ENSMMUG00000001245
N
ENSMPUG00000016477
Mustela putorius furo
ENSMPUG00000016477
N
Myotis_brandtii_ZNF532_10006574
Myotis brandtii
Myotis_brandtii_ZNF532_10006574
N
ZNF532
Myotis lucifugus
ENSMLUG00000000137
N
ZNF532
Ornithorhynchus anatinus
ENSOANG00000003439
N
ZNF532
Otolemur garnettii
ENSOGAG00000016596
N
ZNF532
Tursiops truncatus
ENSTTRG00000007669
N
ZNF532
Vicugna pacos
ENSVPAG00000008243
N