Cagra.6170s0019 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.6170s0019 T202335_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.6170s0019.1.p GRAS 167 526

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_05586 Ancylostoma caninum ANCCAN_05586 N 0.000
ANCCEY_05896 Ancylostoma ceylanicum ANCCEY_05896 N 0.000
DICVIV_10864 Dictyocaulus viviparus DICVIV_10864 N 0.000
HPLM_0000159901 Haemonchus placei HPLM_0000159901 N 0.000
HPBE_0001958101 Heligmosomoides bakeri HPBE_0001958101 N 0.000
NBR_0001149301 Nippostrongylus brasiliensis NBR_0001149301 N 0.000
OESDEN_10194 Oesophagostomum dentatum OESDEN_10194 N 0.000
SVUK_0000060801 Strongylus vulgaris SVUK_0000060801 N 0.000