CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10024743m.g
(
Capsella rubella
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Carubv10024743m.g
T202367_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10024743m
GRAS
267
637
IIEQLFNAAELIGTTGNTNGDHTVLAQGILARLNHHLNSNHKSPFQRAASHIAEALLSLIHNDSSPPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNDSGFDRIHIIDFDVGYGGQWSSLMQELASGGGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEVELLSIELLLNPAYWPLSLRSSEKEAIAVNLPINSVVPGYLPLILRFLKQISPNVVVCSDRGCDRNDAPFPNAVIHALQYHTTLLESLDANQNQDDSSIERFWVQPSIEKLLMKRHRWIERSHPWRSLITQCGFSPASLSQTAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWK
Links
Other
GRAS
family TFs
Other
Capsella rubella
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.13584
Candida albicans
CaO19.13584
N
CaO19.6203
Candida albicans
CaO19.6203
N
CD36_06560
Candida dubliniensis
CD36_06560
N
PGUG_01067
Candida guilliermondii
PGUG_01067
N
G210_4260
Candida maltosa
G210_4260
N
CORT_0A08070
Candida orthopsilosis
CORT_0A08070
N
CPAG_01875
Candida parapsilosis
CPAG_01875
N
CANTEDRAFT_111556
Candida tenuis
CANTEDRAFT_111556
N
CTRG_04183
Candida tropicalis
CTRG_04183
N
DEHA2F25322g
Debaryomyces hansenii
DEHA2F25322g
N
LELG_00816
Lodderomyces elongisporus
LELG_00816
N
PGUG_01067
Meyerozyma guilliermondii
PGUG_01067
N
GNLVRS01_PISO0M06194g
Millerozyma farinosa
GNLVRS01_PISO0M06194g
N
GNLVRS01_PISO0N06349g
Millerozyma farinosa
GNLVRS01_PISO0N06349g
N
fgenesh1_pg.C_chr_6.1000044
Pichia stipitis
fgenesh1_pg.C_chr_6.1000044
N
SPAPADRAFT_131412
Spathaspora passalidarum
SPAPADRAFT_131412
N