CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10008226m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10008226m.g
T202385_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10008226m
GRAS
67
459
MRQLLISCAELFSQSDFSAAHRLISILSASSSPYGDSIERLVHQFIRALSLRLNLHHANATLLMMNITTTTTATTLPYNTTTYNDRNALQSCYLSLNQITPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAEREASHNHPLFLQRFVEAVDHYGAIFDSLEATLPPNSRERLAVEQVWFGREIVEIVATEGENRKERHERFDSWEMILRSCGYSNVPLSGYALSQAKLLLRLHYPSEGYQLQVLNNSLFLGWQNRALFSVSSWH
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF15767
Drosophila ananassae
FBgn0092791
I
GG10108
Drosophila erecta
FBgn0102420
I
GH13551
Drosophila grimshawi
FBgn0121027
I
GATAd
Drosophila melanogaster
FBgn0032223
D
GI18290
Drosophila mojavensis
FBgn0141029
I
GL19159
Drosophila persimilis
FBgn0156758
I
GA18611
Drosophila pseudoobscura
FBgn0078612
I
GD23678
Drosophila simulans
FBgn0195055
I
GJ18119
Drosophila virilis
FBgn0205284
I
GK18561
Drosophila willistoni
FBgn0220559
I
GE18923
Drosophila yakuba
FBgn0236297
I
LCUP014150
Lucilia cuprina
LCUP014150
I