CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10011085m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10011085m.g
T202387_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10011085m
GRAS
445
803
LLTLLLQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB07639.1
Alternaria brassicicola
AB07639.1
I
MCYG_08515
Arthroderma otae
MCYG_08515
I
e_gw1.00083.502.1
Aspergillus carbonarius
e_gw1.00083.502.1
I
ACLA_026280
Aspergillus clavatus
CADACLAG00002102
I
AFUA_1G09190
Aspergillus fumigatus
CADAFUAG00007026
I
ANIA_01368
Aspergillus nidulans
CADANIAG00001243
D
CADANGAG00006390
Aspergillus niger
CADANGAG00006390
I
EURHEDRAFT_506166
Aspergillus ruber
EURHEDRAFT_506166
I
COCC4DRAFT_30331
Bipolaris maydis
COCC4DRAFT_30331
I
COCMIDRAFT_82593
Bipolaris oryzae
COCMIDRAFT_82593
I
COCSADRAFT_39114
Bipolaris sorokiniana
COCSADRAFT_39114
I
COCVIDRAFT_17657
Bipolaris victoriae
COCVIDRAFT_17657
I
COCCADRAFT_33156
Bipolaris zeicola
COCCADRAFT_33156
I
PVAR5_4509
Byssochlamys spectabilis
PVAR5_4509
I
A1O1_05801
Capronia coronata
A1O1_05801
I
A1O3_03555
Capronia epimyces
A1O3_03555
I
PV04_01175
Capronia semiimmersa
PV04_01175
I
Z519_09046
Cladophialophora bantiana
Z519_09046
I
G647_00903
Cladophialophora carrionii
G647_00903
I
PV07_02125
Cladophialophora immunda
PV07_02125
I
A1O5_06619
Cladophialophora psammophila
A1O5_06619
I
A1O7_00849
Cladophialophora yegresii
A1O7_00849
I
CIMG_07148
Coccidioides immitis
CIMG_07148
I
CPC735_034820
Coccidioides posadasii
CPC735_034820
I
HMPREF1541_00475
Cyphellophora europaea
HMPREF1541_00475
I
DOTSEDRAFT_77016
Dothistroma septosporum
DOTSEDRAFT_77016
I
HMPREF1120_02804
Exophiala dermatitidis
HMPREF1120_02804
I
PV10_08753
Exophiala mesophila
PV10_08753
I
PV06_02913
Exophiala oligosperma
PV06_02913
I
PV11_07970
Exophiala sideris
PV11_07970
I
PV08_05229
Exophiala spinifera
PV08_05229
I
Z517_07725
Fonsecaea pedrosoi
Z517_07725
I
HCBG_05364
Histoplasma capsulatum
HCBG_05364
I
LEMA_P054920.1
Leptosphaeria maculans
LEMA_P054920.1
I
MCYG_08515
Microsporum canis
MCYG_08515
I
MGYG_08666
Microsporum gypseum
MGYG_08666
I
PABG_06647
Paracoccidioides brasiliensis
PABG_06647
I
Pc16g02310
Penicillium chrysogenum
Pc16g02310
I
PDIP_41390
Penicillium digitatum
PDIP_41390
I
PMAA_045800
Penicillium marneffei
PMAA_045800
I
PDE_06784
Penicillium oxalicum
PDE_06784
I
PCH_Pc16g02310
Penicillium rubens
PCH_Pc16g02310
I
PTRG_00425
Pyrenophora triticirepentis
PTRG_00425
I
SETTUDRAFT_97479
Setosphaeria turcica
SETTUDRAFT_97479
I
PMAA_045800
Talaromyces marneffei
PMAA_045800
I
TSTA_035040
Talaromyces stipitatus
TSTA_035040
I
TEQG_05772
Trichophyton equinum
TEQG_05772
N
H101_00004
Trichophyton interdigitale
H101_00004
N
H102_05122
Trichophyton rubrum
H102_05122
I
H105_05143
Trichophyton soudanense
H105_05143
I
TESG_01553
Trichophyton tonsurans
TESG_01553
N
UREG_05754
Uncinocarpus reesii
UREG_05754
I
PV09_09353
Verruconis gallopava
PV09_09353
I