CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10025567m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10025567m.g
T202410_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10025567m
GRAS
52
456
MEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALITRAAKSGTCKMLAAMANAHCNLVVHNHKFSVIELASFVDLTPWHRFGFTAANAAILEAVDGCSVVHIVDLSLTHCMQIPTLIDAIANRFEGPPRLKLTVAGATEDVPPMLDLSYEELGTKLVNFARSRNVMLEFRVIPSSYADGFASLIEQMRVQQLVYAESGEALVINCHMMLHYIPEETLNPSTTFSSLNPYSLEYYSSTSISLRSMFLKAIRSLEPTIVVLVDEDADLTANNLVCRLRSAFNYLWIPYDLVDTFLPRGSKQREWYEAAVCWKVENVIAHEGLQRVERLEPKSRWVQRMRNANFRGITFGEEAVSELKTMLDEHAAGWGLKKEEDDLVLTWKGHNAVFASAWV
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_516.1
Carica papaya
evm.TU.supercontig_516.1
N
Lus10018605.g
Linum usitatissimum
Lus10018605.g
N
Lus10039841.g
Linum usitatissimum
Lus10039841.g
N
XM_002326463.1
Populus trichocarpa
POPTR_0001s02990
N
Solyc08g077290.1
Solanum lycopersicum
Solyc08g077290.1
N