CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene30178-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene30178-v1.0-hybrid
T202589_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna30178.1-v1.0-hybrid
GRAS
261
341
LTTMLNQCAQAVASYDQGTASELLRKIRQHSSPDGHATQRLAHYFANGLEARLTGVRTPSFSPLFSRHTSAAEILLAFEMG
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000002769
Astyanax mexicanus
ENSAMXG00000002769
N
ENSCSAG00000000974
Chlorocebus sabaeus
ENSCSAG00000000974
N
ZNF683
Gorilla gorilla
ENSGGOG00000007713
N
ZNF683
Homo sapiens
ENSG00000176083
N
ENSP00000388792
Macaca fascicularis
ENSP00000388792
N
ZNF683
Macaca mulatta
ENSMMUG00000003420
N
ENSONIG00000013583
Oreochromis niloticus
ENSONIG00000013583
N
ENSORLG00000010025
Oryzias latipes
ENSORLG00000010025
N
ZNF683
Pan troglodytes
ENSPTRG00000000383
N
ENSPPYG00000001685
Pongo abelii
ENSPPYG00000001685
N
ENSTRUG00000005618
Takifugu rubripes
ENSTRUG00000005618
N