CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G110100
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.002G110100
T202606_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G110100.1
GRAS
150
520
LVHLLLACAEAVGCRDIHLATSMLSQIGASATPLGDSLQRVSYCFATGLKSRLSLLQNVNGNGTITNCAIDVPMIAREEKMEAFQLLYQTTPYIAFGFMAANEAICQAAQGKGSLHIIDLGMKHTLQWPSLIRALASRPEGPPTLRITALTSDEDLVELEASMKSLVEDASSLSIAMEFHMISEPVTPSLMTRENLNLREGESLYINSVMHLHKYVKESRGSLKAILQAIKKLGPALLTMVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRHSPQRMKIERLHFAEEIRNIVAYEGTDRMERHERADQWRRQLGRAGFQVMGLKCLSQARMMLSVYGCDGYTLGSEKGCLLLGWKGRPLMLASAWQ
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000002146
Ailuropoda melanoleuca
ENSAMEG00000002146
I
Alligator_sinensis_CCG007983.1
Alligator sinensis
Alligator_sinensis_CCG007983.1
I
ENSAPLG00000005838
Anas platyrhynchos
ENSAPLG00000005838
I
TEF
Anolis carolinensis
ENSACAG00000004810
I
Afo_R007951
Aptenodytes forsteri
Afo_R007951
I
ENSAMXG00000015442
Astyanax mexicanus
ENSAMXG00000015442
I
ENSAMXG00000008798
Astyanax mexicanus
ENSAMXG00000008798
I
ENSBTAP00000022056-D1
Bos grunniens
ENSBTAP00000022056-D1
I
TEF
Bos taurus
ENSBTAG00000016580
I
e_gw.273.54.1
Branchiostoma floridae
e_gw.273.54.1
I
e_gw.273.32.1
Branchiostoma floridae
e_gw.273.32.1
I
e_gw.24.282.1
Branchiostoma floridae
e_gw.24.282.1
I
Brh_R010854
Buceros rhinoceros
Brh_R010854
I
CBG10329
Caenorhabditis briggsae
CBG10329
N
CBG06626
Caenorhabditis briggsae
CBG06626
N
CBG01402
Caenorhabditis briggsae
CBG01402
N
nhr-155
Caenorhabditis elegans
WBGene00015758
N
CRE18441
Caenorhabditis remanei
CRE18441
N
CRE24612
Caenorhabditis remanei
CRE24612
N
TEF
Callithrix jacchus
ENSCJAG00000004977
I
Aan_R013230
Calypte anna
Aan_R013230
I
TEF
Canis familiaris
ENSCAFG00000001095
I
TEF
Cavia porcellus
ENSCPOG00000020591
I
ENSCSAG00000005816
Chlorocebus sabaeus
ENSCSAG00000005816
I
CGI_10008414
Crassostrea gigas
CGI_10008414
I
tefa
Danio rerio
ENSDARG00000039117
I
tefb
Danio rerio
ENSDARG00000098103
I
TEF
Dasypus novemcinctus
ENSDNOG00000035257
I
Tef
Dipodomys ordii
ENSDORG00000014982
I
TEF
Equus caballus
ENSECAG00000018137
I
TEF
Felis catus
ENSFCAG00000003674
I
ENSFALG00000011967
Ficedula albicollis
ENSFALG00000011967
I
TEF
Gallus gallus
ENSGALG00000011958
I
hlfb
Gasterosteus aculeatus
ENSGACG00000010103
I
tefb
Gasterosteus aculeatus
ENSGACG00000007628
I
Gfo_R004744
Geospiza fortis
Gfo_R004744
I
TEF
Gorilla gorilla
ENSGGOG00000016460
I
TEF
Homo sapiens
ENSG00000167074
D
ENSSTOG00000019642
Ictidomys tridecemlineatus
ENSSTOG00000019642
I
TEF
Loxodonta africana
ENSLAFG00000013151
I
ENSP00000403078
Macaca fascicularis
ENSP00000403078
I
TEF
Macaca mulatta
ENSMMUG00000005221
I
ENSMEUG00000013604
Macropus eugenii
ENSMEUG00000013604
I
TEF
Meleagris gallopavo
ENSMGAG00000012262
I
ENSMICG00000013518
Microcebus murinus
ENSMICG00000013518
I
TEF
Monodelphis domestica
ENSMODG00000016547
I
ENSMPUG00000016407
Mustela putorius furo
ENSMPUG00000016407
I
Tef
Mus musculus
ENSMUSG00000022389
D
Myotis_brandtii_Tef_10013968
Myotis brandtii
Myotis_brandtii_Tef_10013968
I
TEF
Myotis lucifugus
ENSMLUG00000002459
I
ENSNLEG00000015473
Nomascus leucogenys
ENSNLEG00000015473
I
TEF
Ochotona princeps
ENSOPRG00000013592
I
Ogr14443
Ophisaurus gracilis
Ogr14443
I
ENSONIG00000019694
Oreochromis niloticus
ENSONIG00000019694
I
ENSONIG00000008480
Oreochromis niloticus
ENSONIG00000008480
I
ENSONIG00000012778
Oreochromis niloticus
ENSONIG00000012778
I
TEF
Ornithorhynchus anatinus
ENSOANG00000011535
I
TEF
Oryctolagus cuniculus
ENSOCUG00000012866
I
tefa
Oryzias latipes
ENSORLG00000002582
I
ENSORLG00000011412
Oryzias latipes
ENSORLG00000011412
I
tefb
Oryzias latipes
ENSORLG00000014144
I
TEF
Otolemur garnettii
ENSOGAG00000025997
I
ENSOARG00000018238
Ovis aries
ENSOARG00000018238
I
TEF
Pan troglodytes
ENSPTRG00000014425
I
ENSPANG00000024579
Papio anubis
ENSPANG00000024579
I
ENSPSIG00000006835
Pelodiscus sinensis
ENSPSIG00000006835
I
ENSPFOG00000013950
Poecilia formosa
ENSPFOG00000013950
I
Pvit_18616
Pogona vitticeps
Pvit_18616
I
ENSPPYG00000011867
Pongo abelii
ENSPPYG00000011867
I
TEF
Pteropus vampyrus
ENSPVAG00000001160
I
Tef
Rattus norvegicus
ENSRNOG00000019383
I
ENSSHAG00000009361
Sarcophilus harrisii
ENSSHAG00000009361
I
TEF
Sorex araneus
ENSSARG00000003323
I
TEF
Taeniopygia guttata
ENSTGUG00000009944
I
ENSTRUG00000003893
Takifugu rubripes
ENSTRUG00000003893
I
tefa
Takifugu rubripes
ENSTRUG00000017028
I
tefb
Takifugu rubripes
ENSTRUG00000003565
I
ENSTSYG00000008965
Tarsius syrichta
ENSTSYG00000008965
I
tefa
Tetraodon nigroviridis
ENSTNIG00000012940
I
ENSTNIG00000008098
Tetraodon nigroviridis
ENSTNIG00000008098
I
ENSTNIG00000003545
Tetraodon nigroviridis
ENSTNIG00000003545
I
TEF
Tupaia belangeri
ENSTBEG00000010576
I
TEF
Tursiops truncatus
ENSTTRG00000003365
I
Tal_R002658
Tyto alba
Tal_R002658
I
TEF
Vicugna pacos
ENSVPAG00000002612
I
ENSXMAG00000000678
Xiphophorus maculatus
ENSXMAG00000000678
I