CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G198300
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.006G198300
T202633_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G198300.1
GRAS
241
610
SKQTIMEAASAIAEGKTDVANEILTRLAQDSNAKGNSEQRFVACMLLALKSRINSVENPPPVAELFSKEHAAATQLLYDLSPCFKLGFLAANLAILDATRDQPSCNKLHIIDFDIGKGRQYINLLHALSERGSGKPALVKITAIADNGGDERVKMVEDKLSEIAERFGVCMKFNVVASPKLIDLSRESLGCEPDEPLAINFAFNLYRMPDESVSVENQRDELLRRVKGLTPSVVTLVEHEMNTNTAPFTSRVGEASAYYGALFDSIESSVPREKSERVMVEEGLCRKIANSVSCEGRERVERCEVFGKWRARMSMAGFELKPLSESVAESMRARLNSGNRVNPGFTVKEENGGVCFGWMGRTLTVASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001260501
Anisakis simplex
ASIM_0001260501
N
ALUE_0001079501
Ascaris lumbricoides
ALUE_0001079501
N
Bm5816
Brugia malayi
Bm5816
N
nDi.2.2.2.g06980
Dirofilaria immitis
nDi.2.2.2.g06980
N
EEL_0000883101
Elaeophora elaphi
EEL_0000883101
N
GPUH_0001626001
Gongylonema pulchrum
GPUH_0001626001
N
GPUH_0001669701
Gongylonema pulchrum
GPUH_0001669701
N
nLs.2.1.2.g07861
Litomosoides sigmodontis
nLs.2.1.2.g07861
N
LOAG_16891
Loa loa
LOAG_16891
N
nOo.2.0.1.g05192
Onchocerca ochengi
nOo.2.0.1.g05192
N
WBGene00246018
Onchocerca volvulus
WBGene00246018
N
TCLT_0000250801
Thelazia callipaeda
TCLT_0000250801
N