CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000275704
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000275704
T202851_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000275704
GRAS
431
793
LLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLMNNPATFPPPRTLTPFDVFFKMGAYKVFSEVSPLLQFVNFTCNQALLEALSDADQIHIVDFDIGFGAHWASFMQELPTRNRGISAPSLRITAFASPSTHHPVELGLMRDNLTQFANEIGISFELDVVNLDYLDQNSYSLPIFQTNDSEAVAVNFPIWSTSNQPDALPNVLRFVKQLSPKIVVSLDRGCDRSDLPFPQHILQALQSYINLLESLDAVNVTSDAVSKIERFLLQPKIESTVLGRLRTPDKMPIWKALFASAGFTPVPFSNFTETQAECVVKRNPARGFHVEKRQESLVLCWQRRELISASAWR
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01039
Capronia coronata
A1O1_01039
N
0.000
A1O3_07515
Capronia epimyces
A1O3_07515
N
0.000
PV04_02016
Capronia semiimmersa
PV04_02016
N
0.000
Z519_03501
Cladophialophora bantiana
Z519_03501
N
0.000
G647_00094
Cladophialophora carrionii
G647_00094
N
0.000
PV07_10758
Cladophialophora immunda
PV07_10758
N
0.000
A1O5_04221
Cladophialophora psammophila
A1O5_04221
N
0.000
A1O7_00084
Cladophialophora yegresii
A1O7_00084
N
0.000
HMPREF1541_09623
Cyphellophora europaea
HMPREF1541_09623
N
0.000
A1O9_13137
Exophiala aquamarina
A1O9_13137
N
0.000
PV10_09038
Exophiala mesophila
PV10_09038
N
0.000
PV06_03658
Exophiala oligosperma
PV06_03658
N
0.000
PV11_07856
Exophiala sideris
PV11_07856
N
0.000
PV08_06067
Exophiala spinifera
PV08_06067
N
0.000
PV05_10912
Exophiala xenobiotica
PV05_10912
N
0.000
Z517_08888
Fonsecaea pedrosoi
Z517_08888
N
0.000
Z518_07944
Rhinocladiella mackenziei
Z518_07944
N
0.000