CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000319342
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000319342
T202871_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000319342
GRAS
116
495
LVHLLMAAAEALTGANKSRDLARVILFRLKELVSPTDGSNMERLAAYFTEALQGLLEGAGGLHGKNLIGNGAYRDHGHHPTDDVIAAFQLLQDMSPYVKFGHFTANQAILEAVAHDSRVHVVDYDIMEGIQWASLMQALVSRKEGPPTPHLRITALSRGGSGRRSIGTVQETGRRLTAFAVSIGQPFSFHQCRLDSDETFRPSALKLVKGEALVINCMLNLPHFNYRSQDSIASFLSGSKTLNPRLVTLVEEEVRPAGDGGFVARFMDSLYHYSAVYDSLEAGFPMQNRARALVERVFLGPRIAGSLARIYRANEEVGCSWWEWLGAVGFKPMPISFANHCQAKLLLGLFNDGYRAEEVANHRLVLGWKSRCLLSASIWM
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUA_3G12180
Aspergillus fumigatus
CADAFUAG00005119
N
0.000
ANIA_05052
Aspergillus nidulans
CADANIAG00005337
N
0.000
COCMIDRAFT_94654
Bipolaris oryzae
COCMIDRAFT_94654
N
0.000
COCSADRAFT_122027
Bipolaris sorokiniana
COCSADRAFT_122027
N
0.000
COCVIDRAFT_104890
Bipolaris victoriae
COCVIDRAFT_104890
N
0.000
COCCADRAFT_90843
Bipolaris zeicola
COCCADRAFT_90843
N
0.000
estExt_Genewise1Plus.C_140579
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_140579
N
0.000
DOTSEDRAFT_147401
Dothistroma septosporum
DOTSEDRAFT_147401
N
0.000
PFICI_01986
Pestalotiopsis fici
PFICI_01986
N
0.000
PTRG_02939
Pyrenophora triticirepentis
PTRG_02939
N
0.000
TSTA_096880
Talaromyces stipitatus
TSTA_096880
N
0.000