CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb00874
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Cb00874
T202985_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb00874.1.p
GRAS
298
668
LRTLLTHCAEAVSAGNHLSATALLRQIKQRSSPSGDASQRLAHCFAQGLELRLAGMGAAAKPKRTSAIDHLRAYQLHLQVCSFRMVAFKFSHMAITRAVAGRKKVHIVDYGEHRGFQWPLLLDALATREGGPPEVRITGITFPYPGFRPAARIKETERRLSDFARQRGIPFRFRSIVSARWETISAEDLVMEPDEVLVVNGLFYFGKLMDEGVDDIDSPSPRDMVLGNISKMRPDVFILCVENSSQNAPFFVTRFRETLFYYSAMFDMMDSTAPRDCAERMLVEEIFGHWAMDAIAYEGSDRVLRPETYKQWQTRSNRAGLRQLPLDPDTVRYLSKRVKEGYHNDFVIDVDQQWLLQGWKGRILCAMSTWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Cb00873
Panicum virgatum
Pavir.Cb00873
N
0.705
Pavir.J16280
Panicum virgatum
Pavir.J16280
N
0.714
Sb05g027780
Sorghum bicolor
Sb05g027780
N
0.701
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725
GRMZM2G018254
Zea mays
GRMZM2G018254
N
0.721