CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ga01717
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ga01717
T202997_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga01717.1.p
GRAS
241
614
LSTLLIRCAQAVDTNNYLVAGELLNQIKQHASTTGDATQRLAQCFSKGLEARLMGTGRQLWKSLMAERLSAVEFLKAYNLYMSACYFNKVAYIFSALSIAQVMKGKSRLHIVDYGIHCAFQWVGLVRWLANREGGPPPEMKITAMCLAQPSSFPVQWIDEQRYRLSKYASELGLTFVFEAITTEWEKVCIENLNLDADEVVVVSDLFNFSTLKDESIYFDSPNPRDTVLSNIKKMRPNIFIQSILNCSQGSCFLSRFREMLFYYSALFDMLDVIVPRESELRSVLEQDLFGSCALNGIGCEGVDLVQRPEKYKRWQSRNQRAGLRQLPLRPVVVKVLKDRVKKHHHKEFLLCEEGQWLLQGWKGRALFAHSTWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J03366
Panicum virgatum
Pavir.J03366
N
0.930
Si012318m.g
Setaria italica
Si012318m.g
N
0.821
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700