Pavir.J16240 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J16240 T203058_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J16240.1.p GRAS 266 637
Pavir.J16240.2.p GRAS 266 637
Pavir.J16240.3.p GRAS 266 637
Pavir.J16240.4.p GRAS 266 637
Pavir.J16240.5.p GRAS 266 637
Pavir.J16240.6.p GRAS 266 519

Links

Other GRAS family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04155 Aegilops tauschii F775_04155 N 0.724
BRADI1G03620 Brachypodium distachyon BRADI1G03620 N 0.759
MLOC_2933 Hordeum vulgare MLOC_2933 N 0.719
LPERR04G19190 Leersia perrieri LPERR04G19190 N 0.749
OBART04G23460 Oryza barthii OBART04G23460 N 0.768
OB04G30360 Oryza brachyantha OB04G30360 N 0.762
ORGLA04G0200000 Oryza glaberrima ORGLA04G0200000 N 0.770
OGLUM04G23390 Oryza glumaepatula OGLUM04G23390 N 0.773
BGIOSGA017023 Oryza indica BGIOSGA017023 N 0.773
OLONG_013234 Oryza longistaminata OLONG_013234 N 0.770
ONIVA04G22790 Oryza nivara ONIVA04G22790 N 0.773
OPUNC04G20980 Oryza punctata OPUNC04G20980 N 0.762
ORUFI04G25140 Oryza rufipogon ORUFI04G25140 N 0.773
OS04G0590400 Oryza sativa OS04G0590400 N 0.773
Pavir.Ia00281 Panicum virgatum Pavir.Ia00281 N 0.932
Si034627m.g Setaria italica Si034627m.g N 0.862
Sb01g003110 Sorghum bicolor Sb01g003110 N 0.842
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.700
Traes_5AL_9AE0ED26A Triticum aestivum Traes_5AL_9AE0ED26A N 0.811
Traes_5BL_DF8EC4A24 Triticum aestivum Traes_5BL_DF8EC4A24 N 0.716
GRMZM2G368909 Zea mays GRMZM2G368909 N 0.846