CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J19041
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J19041
T203060_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J19041.1.p
GRAS
6
147
GEPLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRSASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_01402
Aspergillus nidulans
CADANIAG00001203
N
0.000
BDDG_08272
Blastomyces dermatitidis
BDDG_08272
N
0.000
BGHDH14_bgh01891
Blumeria graminis
BGHDH14_bgh01891
I
0.000
Bcin04g03490
Botrytis cinerea
Bcin04g03490
N
0.000
CGGC5_9554
Colletotrichum gloeosporioides
CGGC5_9554
N
0.000
Cob_10954
Colletotrichum orbiculare
Cob_10954
N
0.000
Z517_03846
Fonsecaea pedrosoi
Z517_03846
N
0.000
MBM_05037
Marssonina brunnea
MBM_05037
N
0.000
NFIA_016950
Neosartorya fischeri
CADNFIAG00001487
N
0.000
PABG_06594
Paracoccidioides brasiliensis
PABG_06594
N
0.000
PAAG_11083
Paracoccidioides sp lutzii
PAAG_11083
N
0.000
PEX1_039750
Penicillium expansum
PEX1_039750
N
0.000
PITC_099380
Penicillium italicum
PITC_099380
N
0.000
U727_00431841361
Penicillium solitum
U727_00431841361
N
0.000
GMDG_02644
Pseudogymnoascus destructans
GMDG_02644
N
0.000
V499_03251
Pseudogymnoascus pannorum
V499_03251
N
0.000
SAPIO_CDS10703
Scedosporium apiospermum
SAPIO_CDS10703
N
0.000
SBOR_8201
Sclerotinia borealis
SBOR_8201
N
0.000