CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr4.CM0288.500.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
chr4.CM0288.500.nc
T203283_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr4.CM0288.500.nc
GRAS
170
541
LKQVLILCAQAVSDEDIPTARGWIDNILGKMVSVAGDPSQRLGAYLLEGLRARLELSGSLIYKALKCEQPTGKELMSYMHILYQICPYWKFAYISANAAIAEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRITGVDDSQSFHARGGGLEIVGERLSDFARSYGVPFEFHSAAMSGCEVERENLGVRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLAEQESNTNTSPFFNRFMETLEYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMVACEGAERVERHELFGKWKLRFSMAGFKQWPLSSSVMTATQNLLRDFNHNYRLEQRDGALCLGWMKRALVTSSAWR
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG014285.1
Alligator sinensis
Alligator_sinensis_CCG014285.1
N
0.000
ENSAPLG00000014035
Anas platyrhynchos
ENSAPLG00000014035
N
0.000
Afo_R009911
Aptenodytes forsteri
Afo_R009911
N
0.000
BGLB002717
Biomphalaria glabrata
BGLB002717
N
0.000
Brh_R012356
Buceros rhinoceros
Brh_R012356
N
0.000
Aan_R003320
Calypte anna
Aan_R003320
N
0.000
L3MBTL1
Cavia porcellus
ENSCPOG00000008941
N
0.000
ENSFALG00000012779
Ficedula albicollis
ENSFALG00000012779
N
0.000
ENSGALG00000000983
Gallus gallus
ENSGALG00000000983
N
0.000
Gfo_R014039
Geospiza fortis
Gfo_R014039
N
0.000
ENSLACG00000003590
Latimeria chalumnae
ENSLACG00000003590
N
0.000
L3MBTL1
Loxodonta africana
ENSLAFG00000012575
N
0.000
L3MBTL1
Meleagris gallopavo
ENSMGAG00000000827
N
0.000
Pvit_07756
Pogona vitticeps
Pvit_07756
N
0.000
ENSTBEG00000014200
Tupaia belangeri
ENSTBEG00000014200
N
0.000
Tal_R013237
Tyto alba
Tal_R013237
N
0.000