CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT40K11.90.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjT40K11.90.nc
T203326_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT40K11.90.nc
GRAS
223
585
LVHALMACAEAVQKENHKLADTLVKHIGVVAASQAGAMRKVASYFAQALARRIYGIFPDTVDSSLNDVLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVVDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNSDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIDKVMGTIKKLNPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGAASTGSDSSGQDVVMTEVYLGEQICNVVACEGVDRVERHETLVQWRTRMGSAGFNPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWK
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00112g130
Arthrobotrys oligospora
AOL_s00112g130
N
MCYG_02975
Arthroderma otae
MCYG_02975
N
COCC4DRAFT_60425
Bipolaris maydis
COCC4DRAFT_60425
N
COCMIDRAFT_87933
Bipolaris oryzae
COCMIDRAFT_87933
N
COCSADRAFT_322361
Bipolaris sorokiniana
COCSADRAFT_322361
N
COCVIDRAFT_89505
Bipolaris victoriae
COCVIDRAFT_89505
N
COCCADRAFT_100611
Bipolaris zeicola
COCCADRAFT_100611
N
BDDG_09840
Blastomyces dermatitidis
BDDG_09840
N
Bcin06g03110
Botrytis cinerea
Bcin06g03110
N
CIMG_09999
Coccidioides immitis
CIMG_09999
N
CPC735_011650
Coccidioides posadasii
CPC735_011650
N
W97_05488
Coniosporium apollinis
W97_05488
N
HCBG_02942
Histoplasma capsulatum
HCBG_02942
N
MPH_04816
Macrophomina phaseolina
MPH_04816
N
MCYG_02975
Microsporum canis
MCYG_02975
N
OIDMADRAFT_178173
Oidiodendron maius
OIDMADRAFT_178173
N
PABG_04267
Paracoccidioides brasiliensis
PABG_04267
N
PAAG_04477
Paracoccidioides sp lutzii
PAAG_04477
N
GMDG_06933
Pseudogymnoascus destructans
GMDG_06933
N
V499_01449
Pseudogymnoascus pannorum
V499_01449
N
PTRG_06182
Pyrenophora triticirepentis
PTRG_06182
N
SBOR_3762
Sclerotinia borealis
SBOR_3762
N
SS1G_02851
Sclerotinia sclerotiorum
SS1G_02851
N
SETTUDRAFT_101545
Setosphaeria turcica
SETTUDRAFT_101545
N
TEQG_06658
Trichophyton equinum
TEQG_06658
N
H102_08817
Trichophyton rubrum
H102_08817
N
H105_08842
Trichophyton soudanense
H105_08842
N
UREG_06021
Uncinocarpus reesii
UREG_06021
N