CpipJ_CPIJ016464 (Culex pipiens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 CpipJ_CPIJ016464 T203735_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.809 0.630
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.809 0.630
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.809 0.630
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.809 0.630
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.809 0.630
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.809 0.630
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.809 0.630
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.809 0.630
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.809 0.630
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.720 0.391
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.720 0.391
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.720 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ016464-RA Homeodomain 387 432

Links

Other Homeodomain family TFs
Other Culex pipiens TFs

1247 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015693 Ailuropoda melanoleuca ENSAMEG00000015693 I 0.000
ENSCJAG00000013449 Callithrix jacchus ENSCJAG00000013449 I 0.000
ENSCSAG00000004169 Chlorocebus sabaeus ENSCSAG00000004169 I 0.000
ZNF383 Choloepus hoffmanni ENSCHOG00000009776 I 0.000
ZNF383 Dasypus novemcinctus ENSDNOG00000044355 I 0.000
ZNF383 Echinops telfairi ENSETEG00000008485 I 0.000
ZNF383 Equus caballus ENSECAG00000013403 I 0.000
ZNF383 Felis catus ENSFCAG00000031886 I 0.000
ZNF420 Gorilla gorilla ENSGGOG00000014167 I 0.000
ZNF383 Homo sapiens ENSG00000188283 D 0.000
ENSP00000340132 Macaca fascicularis ENSP00000340132 I 0.000
ZNF383 Macaca mulatta ENSMMUG00000013914 I 0.000
ZNF383 Microcebus murinus ENSMICG00000010169 I 0.000
ENSMPUG00000017852 Mustela putorius furo ENSMPUG00000017852 I 0.000
Zfp383 Mus musculus ENSMUSG00000099689 I 0.000
ENSNLEG00000027020 Nomascus leucogenys ENSNLEG00000027020 I 0.000
ZNF383 Oryctolagus cuniculus ENSOCUG00000029068 I 0.000
ZNF383 Otolemur garnettii ENSOGAG00000031037 I 0.000
ENSOARG00000005383 Ovis aries ENSOARG00000005383 I 0.000
ZNF383 Pan troglodytes ENSPTRG00000010906 I 0.000
ENSPANG00000008018 Papio anubis ENSPANG00000008018 I 0.000
ENSPPYG00000009910 Pongo abelii ENSPPYG00000009910 I 0.000
ZNF383 Pteropus vampyrus ENSPVAG00000003399 I 0.000
ZNF383 Sus scrofa ENSSSCG00000021946 I 0.000
ENSTSYG00000007283 Tarsius syrichta ENSTSYG00000007283 I 0.000
ZNF383 Tursiops truncatus ENSTTRG00000002108 I 0.000
ZNF383 Vicugna pacos ENSVPAG00000004908 I 0.000