CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT4G03250
(
Arabidopsis thaliana
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
AT4G03250
T204500_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK25011.1
M01253_2.00
Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN
PBM
Lambert et al.(2019)
pTH11258
0.679
0.825
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G03250.1
Homeodomain
20
76
SKKRKLKTPMQVMALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWFCHRRLKDKR
Links
Other
Homeodomain
family TFs
Other
Arabidopsis thaliana
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF382
Bos taurus
ENSBTAG00000008084
I
0.000
ZNF382
Callithrix jacchus
ENSCJAG00000009464
I
0.000
ZNF382
Canis familiaris
ENSCAFG00000006524
I
0.000
ZNF382
Cavia porcellus
ENSCPOG00000002209
I
0.000
ENSCSAG00000004201
Chlorocebus sabaeus
ENSCSAG00000004201
I
0.000
ZNF382
Choloepus hoffmanni
ENSCHOG00000004936
I
0.000
ZNF382
Dasypus novemcinctus
ENSDNOG00000032742
I
0.000
ENSDORG00000016099
Dipodomys ordii
ENSDORG00000016099
I
0.000
ZNF382
Equus caballus
ENSECAG00000018834
I
0.000
ZNF382
Felis catus
ENSFCAG00000026545
I
0.000
ZNF382
Gorilla gorilla
ENSGGOG00000009292
I
0.000
ZNF382
Homo sapiens
ENSG00000161298
D
0.000
ENSSTOG00000021574
Ictidomys tridecemlineatus
ENSSTOG00000021574
I
0.000
ZNF382
Loxodonta africana
ENSLAFG00000011372
I
0.000
ENSP00000292928
Macaca fascicularis
ENSP00000292928
I
0.000
ZNF382
Macaca mulatta
ENSMMUG00000016449
I
0.000
ENSMPUG00000005592
Mustela putorius furo
ENSMPUG00000005592
I
0.000
Zfp382
Mus musculus
ENSMUSG00000074220
I
0.000
Myotis_brandtii_ZNF382_10004803
Myotis brandtii
Myotis_brandtii_ZNF382_10004803
I
0.000
ZNF382
Myotis lucifugus
ENSMLUG00000015074
I
0.000
ENSNLEG00000003063
Nomascus leucogenys
ENSNLEG00000003063
I
0.000
ZNF382
Otolemur garnettii
ENSOGAG00000025946
I
0.000
ENSOARG00000005318
Ovis aries
ENSOARG00000005318
I
0.000
ZNF382
Pan troglodytes
ENSPTRG00000010898
I
0.000
ENSPANG00000010969
Papio anubis
ENSPANG00000010969
I
0.000
ENSPPYG00000009904
Pongo abelii
ENSPPYG00000009904
I
0.000
ZNF382
Procavia capensis
ENSPCAG00000004980
I
0.000
ZNF382
Pteropus vampyrus
ENSPVAG00000014052
I
0.000
Zfp382
Rattus norvegicus
ENSRNOG00000020777
D
0.000
ZNF382
Sorex araneus
ENSSARG00000009413
I
0.000
ZNF382
Sus scrofa
ENSSSCG00000002933
I
0.000
ENSTSYG00000014470
Tarsius syrichta
ENSTSYG00000014470
I
0.000
ZNF382
Tursiops truncatus
ENSTTRG00000001414
I
0.000
ZNF382
Vicugna pacos
ENSVPAG00000009825
I
0.000