ATML1 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT4G21750 T204507_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00		 Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203		 (Direct) (Direct)
ATML1
M10626_2.00		 Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.853 0.965
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.853 0.965
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.841 0.789
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.825 0.772
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.825 0.772
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.802 0.754
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.802 0.754
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.802 0.667
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.786 0.789
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.786 0.789
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.786 0.789
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.744 0.719
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.744 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02048_2.00 Homeodomain 51 107

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G21750.1 Homeodomain 63 119
AT4G21750.2 Homeodomain 63 119
AT4G21750.3 Homeodomain 63 119
AT4G21750.4 Homeodomain 63 119

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

618 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_014300 Acremonium chrysogenum ACRE_014300 I
AOL_s00140g62 Arthrobotrys oligospora AOL_s00140g62 I
fgenesh1_pm.00009_#_164 Aspergillus carbonarius fgenesh1_pm.00009_#_164 I
ACLA_091060 Aspergillus clavatus CADACLAG00008741 I
CADAFLAG00008913 Aspergillus flavus CADAFLAG00008913 I
AFUA_2G03460 Aspergillus fumigatus CADAFUAG00003363 I
ANIA_04486 Aspergillus nidulans CADANIAG00005959 I
CADANGAG00006067 Aspergillus niger CADANGAG00006067 I
CADAORAG00011392 Aspergillus oryzae CADAORAG00011392 I
EURHEDRAFT_400169 Aspergillus ruber EURHEDRAFT_400169 I
ATEG_09543 Aspergillus terreus CADATEAG00004294 I
BBA_01414 Beauveria bassiana BBA_01414 I
COCC4DRAFT_53548 Bipolaris maydis COCC4DRAFT_53548 I
COCMIDRAFT_36857 Bipolaris oryzae COCMIDRAFT_36857 I
COCSADRAFT_116952 Bipolaris sorokiniana COCSADRAFT_116952 I
COCVIDRAFT_97328 Bipolaris victoriae COCVIDRAFT_97328 I
COCCADRAFT_37638 Bipolaris zeicola COCCADRAFT_37638 I
BDDG_07206 Blastomyces dermatitidis BDDG_07206 I
BGHDH14_bgh03098 Blumeria graminis BGHDH14_bgh03098 I
Bcin05g02780 Botrytis cinerea Bcin05g02780 I
PVAR5_2013 Byssochlamys spectabilis PVAR5_2013 I
A1O1_06908 Capronia coronata A1O1_06908 I
A1O3_10521 Capronia epimyces A1O3_10521 I
PV04_02143 Capronia semiimmersa PV04_02143 I
CTHT_0058750 Chaetomium thermophilum CTHT_0058750 I
Z519_12680 Cladophialophora bantiana Z519_12680 I
PV07_02432 Cladophialophora immunda PV07_02432 I
CPUR_00123 Claviceps purpurea CPUR_00123 I
CIMG_04520 Coccidioides immitis CIMG_04520 I
CPC735_072600 Coccidioides posadasii CPC735_072600 I
estExt_Genewise1Plus.C_270143 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_270143 I
CFIO01_08387 Colletotrichum fioriniae CFIO01_08387 I
CGGC5_8879 Colletotrichum gloeosporioides CGGC5_8879 I
GLRG_00601 Colletotrichum graminicola GLRG_00601 I
CH063_09643 Colletotrichum higginsianum CH063_09643 I
Cob_13285 Colletotrichum orbiculare Cob_13285 I
CSUB01_06778 Colletotrichum sublineola CSUB01_06778 I
CCM_00085 Cordyceps militaris CCM_00085 I
gw1.6.911.1 Cryphonectria parasitica gw1.6.911.1 I
H072_4151 Dactylellina haptotyla H072_4151 I
DRE_07274 Drechslerella stenobrocha DRE_07274 I
EPUS_07641 Endocarpon pusillum EPUS_07641 I
EV44_g6013 Erysiphe necator EV44_g6013 I
A1O9_06785 Exophiala aquamarina A1O9_06785 I
HMPREF1120_04416 Exophiala dermatitidis HMPREF1120_04416 I
PV10_03556 Exophiala mesophila PV10_03556 I
PV06_07805 Exophiala oligosperma PV06_07805 I
PV11_03679 Exophiala sideris PV11_03679 I
PV08_03313 Exophiala spinifera PV08_03313 I
PV05_07550 Exophiala xenobiotica PV05_07550 I
Z517_00029 Fonsecaea pedrosoi Z517_00029 I
FFUJ_00519 Fusarium fujikuroi FFUJ_00519 I
FGRRES_00719 Fusarium graminearum FGRRES_00719 I
FOXG_01048 Fusarium oxysporum FOXG_01048 I
FPSE_00332 Fusarium pseudograminearum FPSE_00332 I
NechaG31073 Fusarium solani NechaG31073 I
GGTG_00361 Gaeumannomyces graminis GGTG_00361 I
CMQ_1121 Grosmannia clavigera CMQ_1121 I
HCBG_00443 Histoplasma capsulatum HCBG_00443 I
LEMA_P067560.1 Leptosphaeria maculans LEMA_P067560.1 I
MGG_00672 Magnaporthe oryzae MGG_00672 I
MAPG_07499 Magnaporthe poae MAPG_07499 I
MBM_03894 Marssonina brunnea MBM_03894 I
MBR_08359 Metarhizium brunneum MBR_08359 I
MGU_03630 Metarhizium guizhouense MGU_03630 I
MAJ_07134 Metarhizium majus MAJ_07134 I
X797_006259 Metarhizium robertsii X797_006259 I
MYCTH_2294353 Myceliophthora thermophila MYCTH_2294353 I
e_gw1.1.122.1 Nectria haematococca e_gw1.1.122.1 I
NFIA_035810 Neosartorya fischeri CADNFIAG00003215 I
vad-2 Neurospora crassa NCU02094 D
estExt_Genewise1Plus.C_20576 Neurospora discreta estExt_Genewise1Plus.C_20576 I
NEUTE1DRAFT_149383 Neurospora tetrasperma NEUTE1DRAFT_149383 I
OIDMADRAFT_128988 Oidiodendron maius OIDMADRAFT_128988 I
OIDMADRAFT_129597 Oidiodendron maius OIDMADRAFT_129597 I
F503_03035 Ophiostoma piceae uamh F503_03035 I
PABG_01031 Paracoccidioides brasiliensis PABG_01031 I
PAAG_06733 Paracoccidioides sp lutzii PAAG_06733 I
Pc18g04740 Penicillium chrysogenum Pc18g04740 I
PDIP_71520 Penicillium digitatum PDIP_71520 I
PEX1_086470 Penicillium expansum PEX1_086470 I
PITC_092050 Penicillium italicum PITC_092050 I
PMAA_046980 Penicillium marneffei PMAA_046980 I
PDE_05300 Penicillium oxalicum PDE_05300 I
PCH_Pc18g04740 Penicillium rubens PCH_Pc18g04740 I
PFICI_13275 Pestalotiopsis fici PFICI_13275 I
SNOG_00452 Phaeosphaeria nodorum SNOG_00452 I
GMDG_07312 Pseudogymnoascus destructans GMDG_07312 I
V499_06303 Pseudogymnoascus pannorum V499_06303 I
PTT_13781 Pyrenophora teres PTT_13781 I
PTRG_10320 Pyrenophora triticirepentis PTRG_10320 I
Z518_02832 Rhinocladiella mackenziei Z518_02832 I
SAPIO_CDS7657 Scedosporium apiospermum SAPIO_CDS7657 I
SBOR_0836 Sclerotinia borealis SBOR_0836 I
SS1G_05760 Sclerotinia sclerotiorum SS1G_05760 I
SETTUDRAFT_134649 Setosphaeria turcica SETTUDRAFT_134649 I
SMAC_04990 Sordaria macrospora SMAC_04990 I
SPBR_06677 Sporothrix brasiliensis SPBR_06677 I
HMPREF1624_07062 Sporothrix schenckii HMPREF1624_07062 I
S40288_06943 Stachybotrys chartarum S40288_06943 I
S40285_06808 Stachybotrys chlorohalonata S40285_06808 I
SNOG_00452 Stagonospora nodorum SNOG_00452 I
PMAA_046980 Talaromyces marneffei PMAA_046980 I
TSTA_036550 Talaromyces stipitatus TSTA_036550 I
THITE_2121261 Thielavia terrestris THITE_2121261 I
VHEMI05022 Torrubiella hemipterigena VHEMI05022 I
TRIATDRAFT_80549 Trichoderma atroviride TRIATDRAFT_80549 I
TRIREDRAFT_108872 Trichoderma reesei TRIREDRAFT_108872 I
TRIVIDRAFT_33222 Trichoderma virens TRIVIDRAFT_33222 I
H101_06817 Trichophyton interdigitale H101_06817 I
H102_02066 Trichophyton rubrum H102_02066 I
H105_02085 Trichophyton soudanense H105_02085 I
TESG_05591 Trichophyton tonsurans TESG_05591 I
UV8b_1944 Ustilaginoidea virens UV8b_1944 I