BGIOSGA010073 (Oryza indica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BGIOSGA010073 T204697_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.728 0.633
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.728 0.612
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.728 0.612
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.715 0.633
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.686 0.857
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.651 0.510
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.642 0.449
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.642 0.449
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.642 0.449
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.642 0.449
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.608 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA010073-PA Homeodomain 231 282

Links

Other Homeodomain family TFs
Other Oryza indica TFs

1227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MCYG_07072 Arthroderma otae MCYG_07072 I 0.000
fgenesh1_pg.00083_#_465 Aspergillus carbonarius fgenesh1_pg.00083_#_465 I 0.000
ACLA_022420 Aspergillus clavatus CADACLAG00003042 I 0.000
CADAFLAG00003726 Aspergillus flavus CADAFLAG00003726 I 0.000
AFUA_1G13050 Aspergillus fumigatus CADAFUAG00006933 I 0.000
ANIA_00644 Aspergillus nidulans CADANIAG00002032 I 0.000
CADAORAG00006144 Aspergillus oryzae CADAORAG00006144 I 0.000
ATEG_00500 Aspergillus terreus CADATEAG00010173 I 0.000
BDDG_02733 Blastomyces dermatitidis BDDG_02733 I 0.000
PVAR5_5224 Byssochlamys spectabilis PVAR5_5224 I 0.000
CHGG_02666 Chaetomium globosum CHGG_02666 N 0.000
CPC735_025280 Coccidioides posadasii CPC735_025280 I 0.000
HCBG_05540 Histoplasma capsulatum HCBG_05540 D 0.000
MGG_02474 Magnaporthe oryzae MGG_02474 N 0.000
MCYG_07072 Microsporum canis MCYG_07072 I 0.000
MGYG_03574 Microsporum gypseum MGYG_03574 I 0.000
MYCTH_2300604 Myceliophthora thermophila MYCTH_2300604 N 0.000
NFIA_012470 Neosartorya fischeri CADNFIAG00001701 I 0.000
PABG_06783 Paracoccidioides brasiliensis PABG_06783 I 0.000
PAAG_00524 Paracoccidioides sp lutzii PAAG_00524 I 0.000
Pc13g12350 Penicillium chrysogenum Pc13g12350 I 0.000
PDIP_26540 Penicillium digitatum PDIP_26540 I 0.000
PEX1_000130 Penicillium expansum PEX1_000130 I 0.000
PITC_056440 Penicillium italicum PITC_056440 I 0.000
PMAA_067790 Penicillium marneffei PMAA_067790 I 0.000
PDE_00136 Penicillium oxalicum PDE_00136 I 0.000
PCH_Pc13g12350 Penicillium rubens PCH_Pc13g12350 I 0.000
U727_0043367121 Penicillium solitum U727_0043367121 I 0.000
PMAA_067790 Talaromyces marneffei PMAA_067790 I 0.000
TSTA_087860 Talaromyces stipitatus TSTA_087860 I 0.000
THITE_2106736 Thielavia terrestris THITE_2106736 N 0.000
TEQG_08308 Trichophyton equinum TEQG_08308 I 0.000
H101_02410 Trichophyton interdigitale H101_02410 I 0.000
H102_04072 Trichophyton rubrum H102_04072 I 0.000
H105_04102 Trichophyton soudanense H105_04102 I 0.000