HOX2 (Oryza indica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BGIOSGA022272 T204733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.795 0.842
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.795 0.842
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.795 0.825
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.772 0.789
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.749 0.807
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.749 0.807
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.749 0.807
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.747 0.789
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.747 0.789
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.728 0.649
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.728 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA022272-PA Homeodomain 113 169

Links

Other Homeodomain family TFs
Other Oryza indica TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011359 Aedes aegypti AAEL011359 N 0.000
AALB003318 Anopheles albimanus AALB003318 N 0.000
AARA010518 Anopheles arabiensis AARA010518 N 0.000
ACOM037786 Anopheles coluzzii ACOM037786 N 0.000
ACUA021284 Anopheles culicifacies ACUA021284 N 0.000
ACUA009064 Anopheles culicifacies ACUA009064 N 0.000
ADAC003441 Anopheles darlingi ADAC003441 N 0.000
ADIR001048 Anopheles dirus ADIR001048 N 0.000
AEPI002999 Anopheles epiroticus AEPI002999 N 0.000
AFAF003258 Anopheles farauti AFAF003258 N 0.000
AFUN002858 Anopheles funestus AFUN002858 N 0.000
AGAP013287 Anopheles gambiae AGAP013287 N 0.000
AMAM002295 Anopheles maculatus AMAM002295 N 0.000
AMEC007532 Anopheles melas AMEC007532 N 0.000
AMEM000708 Anopheles merus AMEM000708 N 0.000
AMIN005282 Anopheles minimus AMIN005282 N 0.000
AQUA008196 Anopheles quadriannulatus AQUA008196 N 0.000
ASIS002506 Anopheles sinensis ASIS002506 N 0.000
ASTEI10578 Anopheles stephensi ASTEI10578 N 0.000
GB45138 Apis mellifera GB45138 N 0.000
ACEP10864 Atta cephalotes ACEP10864 N 0.000
Cflo_11381--XP_391906.3_APIME Camponotus floridanus Cflo_11381--XP_391906.3_APIME N 0.000
CpipJ_CPIJ019088 Culex pipiens CpipJ_CPIJ019088 N 0.000
CPIJ019088 Culex quinquefasciatus CPIJ019088 N 0.000
KGM_16908 Danaus plexippus KGM_16908 N 0.000
GF21808 Drosophila ananassae FBgn0098808 N 0.000
GG17798 Drosophila erecta FBgn0110020 N 0.000
GH12805 Drosophila grimshawi FBgn0120284 N 0.000
NFAT Drosophila melanogaster FBgn0030505 N 0.000
GI15077 Drosophila mojavensis FBgn0137827 N 0.000
GL22604 Drosophila persimilis FBgn0160195 N 0.000
GM17623 Drosophila sechellia FBgn0172531 N 0.000
GJ18884 Drosophila virilis FBgn0206030 N 0.000
GK24938 Drosophila willistoni FBgn0226897 N 0.000
GE17094 Drosophila yakuba FBgn0234577 N 0.000
HHAL007230-PA Halyomorpha halys HHAL007230-PA N 0.000
Hsal_04301--XP_391906.3_APIME Harpegnathos saltator Hsal_04301--XP_391906.3_APIME N 0.000
LDEC006285 Leptinotarsa decemlineata LDEC006285 N 0.000
MDOA013115 Musca domestica MDOA013115 N 0.000
NV18092 Nasonia vitripennis NV18092 N 0.000
PHUM363570 Pediculus humanus PHUM363570 N 0.000
SINV15756 Solenopsis invicta SINV15756 N 0.000
TC014708 Tribolium castaneum TC014708 N 0.000
L798_07911 Zootermopsis nevadensis L798_07911 N 0.000