CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DRGX
(
Choloepus hoffmanni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCHOG00000007456
T207777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.726
0.556
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.726
0.556
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.726
0.556
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.726
0.556
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.726
0.556
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.726
0.556
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.726
0.556
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.726
0.556
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.726
0.556
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.653
0.378
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.653
0.378
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.653
0.378
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000006599
Homeodomain
32
79
KQRRNPTIFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQX
Links
Other
Homeodomain
family TFs
Other
Choloepus hoffmanni
TFs
1072 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_11141
Colletotrichum fioriniae
CFIO01_11141
N
0.000
CGGC5_1524
Colletotrichum gloeosporioides
CGGC5_1524
N
0.000
CH063_10692
Colletotrichum higginsianum
CH063_10692
N
0.000
FFUJ_01949
Fusarium fujikuroi
FFUJ_01949
N
0.000
FOXG_10985
Fusarium oxysporum
FOXG_10985
N
0.000
FVEG_09816
Fusarium verticillioides
FVEG_09816
N
0.000
MBR_06285
Metarhizium brunneum
MBR_06285
N
0.000
MAJ_06580
Metarhizium majus
MAJ_06580
N
0.000
X797_007609
Metarhizium robertsii
X797_007609
N
0.000
PFICI_14907
Pestalotiopsis fici
PFICI_14907
N
0.000
S40288_05160
Stachybotrys chartarum
S40288_05160
N
0.000